Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01474 ATGGCTCATACAATCCACTTTATCATTTTGATGCACATTTGCACCATGGTTGTTGCTACAAGCAATGACATAACATGGAGACCCAAATTCTCATCCATTCTAGTCTTTGGGGATTCAACAGTAGACACAGGCAATAACAACTACATCAATACTTTGGGTAAGGGAAATCATTTACCTTATGGGAGGGATTTCCCTAGTCATGTGCCTACTGGTAGATTCTCTAATGGAAAATTGGTTATTGATTTCCTTGCCTCTGCATTGAACCTCAAAGACACTGTCCCTCCTTTCCTAGATCCGAACCTATCAGATGAAGAGCTTTTAACAGGTGTTAGCTTCGCATCTGGGGGATCAGGTTTTGATGATTTGACCACAGTTGTATCCGGTGCCATATCAGTGTCCAAGCAAATTGAGTACTTTAAAGTTTATGTAGCAAAGCTCAAGCGCATTGCAGGGGAAAATGAAGCTAAACAAATACTTGAAGATGCTTTGGTTATTATTTGTGCTGGAACTAATGATTTCCTTTTCAATTTTTATGACATTCCCACTAGAACGTTGGAGTTCAACATAAGTGGATACCAAGATTATCTGCAGAATAGGCTTCAAATGTTTATTAAGGAACTATACGACCTTGGATGCAGAAAATTTGCTGTCACTGGGCTTCCTTCCATTGGTTGTATACCTCTTCAAATAACAGCCAAGTTTGTAAAGGATAGGAAATGTGTTGAGGACGAGAATTCAGATGCCAAGATCTACAACCAAAAATTGGCAAGGCGTTTACTTCAGATACAAGCACTGCTTCCACGAAGCAGGGTTGTTTATACAGACATATATGACCCCTTGATCAGCCTTATCAATCAACCTGAAAAATATGGTTTCAAGGAAACAAATAAAGGGTGCTGTGGAACTGGCTTATTTGAAGTAACTCCATTGTGTAATGAAATCACACCAGTATGTCTTGACGCTTCAAAATATGTATTTTGGGACAGCGTCCATCCAACTGAAGCAGTTTACCAATATGTTGCTAAGTACATAGAAATGGAAGTCCTGCCCAAGTTCCAATTTCATGCGGATTATATATATTTTTAA 1086 0.3895 MAHTIHFIILMHICTMVVATSNDITWRPKFSSILVFGDSTVDTGNNNYINTLGKGNHLPYGRDFPSHVPTGRFSNGKLVIDFLASALNLKDTVPPFLDPNLSDEELLTGVSFASGGSGFDDLTTVVSGAISVSKQIEYFKVYVAKLKRIAGENEAKQILEDALVIICAGTNDFLFNFYDIPTRTLEFNISGYQDYLQNRLQMFIKELYDLGCRKFAVTGLPSIGCIPLQITAKFVKDRKCVEDENSDAKIYNQKLARRLLQIQALLPRSRVVYTDIYDPLISLINQPEKYGFKETNKGCCGTGLFEVTPLCNEITPVCLDASKYVFWDSVHPTEAVYQYVAKYIEMEVLPKFQFHADYIYF. 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01474 361 Gene3D SGNH hydrolase 20 349 IPR036514 -
Seca8g01474 361 CDD SGNH_plant_lipase_like 32 344 IPR035669 -
Seca8g01474 361 Pfam GDSL-like Lipase/Acylhydrolase 33 344 IPR001087 GO:0016788
Seca8g01474 361 PANTHER GDSL ESTERASE/LIPASE EXL3 15 343 - -
Seca8g01474 361 FunFam GDSL esterase/lipase APG 22 348 - -
Seca8g01474 361 SUPERFAMILY SGNH hydrolase 32 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01474 Seca-Chr8 25364630 25367878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01474 30 348 Pollen Coat Proteome AT1G75910 34.756 6.30e-62 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01474 - - gmx:100817270 609.372