Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01467 ATGGCTCCAATTTATGACATACACGGGGCTCCTCCGGGCGTTGGCGTAACCCCAAACGGGACCATATGGACATGTGAGCAAACAACCAAGTTTCAAAGGTCAAAAGGGATATTCTTTGGTGATAACCCATTAACTTTCACGCTTCCAGTGCTCATTCTACAGACCTCTTTAGTTGGATTATTGACCACATTCTTAAAGTTCCTACTTACCCCACTTGGACAGAGTAGCTTCTTGCCATATGTACTGGCAGGCTTGATTATGGGGCCATCAGTACTTGGGCAATTTGAAAGCATTAACAAATGGTTATTCCCACCAAAATCTTTCTATGTAAGTAAGACAATAGCCTTTTTCGGGAGCATGCTGTTTATGTTCTACGTTGGAATAAAACTAGATGTAAGCATGGTACTGAGAACAGGGAAAAAGGCTTGGGTCATTGGCATGTGTTCTTTTATAATGCCATTGATATTTAGCACATCAATTTCTCTTGCTCTACGAAAACTCTTGCCCTCAGATCAAAATCTCCACCAGTCCCTAATTTATGTCGCATTTTTCTTAACATCTAGTTCTTTCCATGTCACTGCCATTCATTTAGCAGATTTAAAGCTCCTAAATTCAGAGATTGGTCAAATTGCAATCTCTGCAGCTACAGTGAGTGGATTAGTCTCTGCTTTGTGGGTAACCTCTTTATTCACACATAGTCAAAGTTCCCTCTCCCATGGTGGCGCTTTCAATGTGACTATGATTTCTTGGATTGTAATGTTGGTTTTCATAATTTGCGTTCTTCGGCCCATAATGTGTTGGATGATACGCCAAACACCTGAAGGGAAACCCATTAAAGAGTCTTACATAATCTCTGTTTTTCTCATGTTGTTTGGATGTGCATTATTCAGTGAGTTGGTTGGGGAGCACTTTCTTGTTGGGCCTATTATTTTGGGCATGGCAGTACCAGATGGGCCTCCACTAGGATCAGCATTGGCTGAAAGGATGGATACCTTGGTCTCAATAGTCTTTTTACCATTGTACTTCCTCTTCAGTGGTGGTAGATTCAAGCTCTTTCTACTTGATACCCCTGGCTTTCTAATTGTGCAAGTTGTTGCTATTTTTAGCTTTTGTGGGAAGGTGATAGGAACCATGTTGCCTTCAATTTACTTCAAGATGCCAGTGATTGATGCTCTCTCCTTAGGTCTACTTATGAGTGCACAAGGCATCACCCAGTTGATTTACTTACAAACCTGTGTGACTCTTCATGTTATAAATGAAGAAACATATAGTAATGCGATAATAGCATTAATATGGTTGACAGGAGCCACCACACCCATAGTGAAATTCTTGTATGATCCATCTAAGTCATACTTGTCCTTAAACAGGAGGAGGACCATTGAGCATGCACCTCCAAATGTTGAACTCCGTTTAATGGCATGCATACACAGTCAAGACAATACCCCTTCTATAATCAATGTTCTTGAAATGTCCAACCCCACACAAGAAAGTCCAATTTGCTTCTATGTCCTTCATCTCGTTCAATTAAAAGGTAGATCATCCCCACTTTTCATAGATCATCAACCTACCAATAAGACAAATAATCCATCATACTCTAGTCATTCACAACACATAATAAATGCCTTTAGATCATATGAGCAACAAAACTTAGGCCATGTGTTAGTGAAACTCTACACATCTATTTCCCCTTATGAGACAATGCATGATGAGATATGTATGCAACTTGCTGAGAAAAGAGCATCTATGCTAATTGTGCCTTTTCATAGGCAATGGATACCAAATAAGATTACAGAATCAGCACATCGTATTAGAGCATTGAACCGTCATTTGCTCAGAACTGCACCTTGTTCTGTTGGGGTTCTAGTTGAACGTGGTACCTTGAGTAGGAACAACCCTTTAACTTGTGTGTCATTTTACAGCGTTGGAATGATTTTTATTGAAGGGTCAGATGATCGTGAAGCCTTAGCATTTGCAATGCGCATGGCTAATCACCCAAATGTGAGGGTCACGGTAATTCGGTTAATGGAGCCTCGTATGAAGAGCAAGAATTTGATGGGTAGGGACCCTGATGGAGATATGATTCACAAGTTTATGGTAGATTACATACAAGTCAAACGCCATGATTATAGAGAAGAAATAGTGAGAGATAGTGTTGAAATGATTAACGTTGTGCGGTCACTAGAAGGTTGCTATGATTTGATTTTGGTTGGTAGACGCCATGCAAGTGAGTCATTGTTATTTAGTGGATTGAAAGAATGGAATGAGTATCCAGAACTTGGCACTGTAGGAGACATGTTAGTGGCTTCAGATTCAACTTTTGATGGGTCTGTGTTGGTAGTGCAACAACAAAAGAGCTTAGAGATTGGTGTTGGTCACCATGATTTGCATCTAGACCATGCTATCAATTATGCCAAACAAGAACCCTCAACAATTGTGGAAATGCCTCGTTATACAAAGATGCGGAATATTTAA 2472 0.4017 MAPIYDIHGAPPGVGVTPNGTIWTCEQTTKFQRSKGIFFGDNPLTFTLPVLILQTSLVGLLTTFLKFLLTPLGQSSFLPYVLAGLIMGPSVLGQFESINKWLFPPKSFYVSKTIAFFGSMLFMFYVGIKLDVSMVLRTGKKAWVIGMCSFIMPLIFSTSISLALRKLLPSDQNLHQSLIYVAFFLTSSSFHVTAIHLADLKLLNSEIGQIAISAATVSGLVSALWVTSLFTHSQSSLSHGGAFNVTMISWIVMLVFIICVLRPIMCWMIRQTPEGKPIKESYIISVFLMLFGCALFSELVGEHFLVGPIILGMAVPDGPPLGSALAERMDTLVSIVFLPLYFLFSGGRFKLFLLDTPGFLIVQVVAIFSFCGKVIGTMLPSIYFKMPVIDALSLGLLMSAQGITQLIYLQTCVTLHVINEETYSNAIIALIWLTGATTPIVKFLYDPSKSYLSLNRRRTIEHAPPNVELRLMACIHSQDNTPSIINVLEMSNPTQESPICFYVLHLVQLKGRSSPLFIDHQPTNKTNNPSYSSHSQHIINAFRSYEQQNLGHVLVKLYTSISPYETMHDEICMQLAEKRASMLIVPFHRQWIPNKITESAHRIRALNRHLLRTAPCSVGVLVERGTLSRNNPLTCVSFYSVGMIFIEGSDDREALAFAMRMANHPNVRVTVIRLMEPRMKSKNLMGRDPDGDMIHKFMVDYIQVKRHDYREEIVRDSVEMINVVRSLEGCYDLILVGRRHASESLLFSGLKEWNEYPELGTVGDMLVASDSTFDGSVLVVQQQKSLEIGVGHHDLHLDHAINYAKQEPSTIVEMPRYTKMRNI. 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01467 823 PANTHER CATION/H + ANTIPORTER 33 785 - -
Seca8g01467 823 Pfam Sodium/hydrogen exchanger family 57 441 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca8g01467 823 Gene3D - 50 450 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01467 Seca-Chr8 25266085 25270391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01467 34 782 Antiporter Super Family AT2G13620 36.340 2.43e-162 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01467 K26731 - gmx:100790451 999.579