Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01440 ATGATGACCCTACACCATTTGAAACGACACACAAGGTGTTGTTTTGGGATCATGCTCAACAACCTATTCAATGATGGCATGGCAAGTGATGCTCGATTGGTGACTAGTGTGGTGATGGACAAATGCAAGTGGGTGTTCAATGGATTGGAGTCATTGGTTGATGTTGGGGGAGGCACGGGGACTATGGCAAAGGCCATTGCTACATCATTCCCAAAGATGGAGTGCATTGTATTTGATTTGCCACATGTTGTTGCTCGTTTGGAAGGAAGTGAGAACCTAAAATATGTTGGTGGGGACATGTTTAAGGCAATCCCTCCGGCTGATGCCATTTTGTTGAAGTGGATATTGCATGATTGGAATGATGAGGAATGTATAAACATATTGAAGAAATGTAAAGAAGCAATCACAAGCAAAGGCAAAAAAGGGAAGGTGATTATCATAGACATGGTAATGGAGAATGAGAATGGAGATGAAGAATCAATTGAAACACAACTCTTCTTTGATATGCTGATGATGACATTGGTCACGGGAAAGGAGAGAAACAAAAAAGAATGGGTTAAGTTGATTTCCTATGTCGGTTTCAGAGATTTCAAGATAACTCCAGTTTTGGGCTTAAGGTCTCTCATTGAGATCTATCCATAG 642 0.4097 MMTLHHLKRHTRCCFGIMLNNLFNDGMASDARLVTSVVMDKCKWVFNGLESLVDVGGGTGTMAKAIATSFPKMECIVFDLPHVVARLEGSENLKYVGGDMFKAIPPADAILLKWILHDWNDEECINILKKCKEAITSKGKKGKVIIIDMVMENENGDEESIETQLFFDMLMMTLVTGKERNKKEWVKLISYVGFRDFKITPVLGLRSLIEIYP. 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01440 213 Pfam O-methyltransferase domain 20 195 IPR001077 GO:0008171
Seca8g01440 213 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 213 IPR016461 GO:0008168
Seca8g01440 213 PANTHER O-METHYLTRANSFERASE 19 194 IPR016461 GO:0008168
Seca8g01440 213 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 20 211 IPR029063 -
Seca8g01440 213 Gene3D Vaccinia Virus protein VP39 6 213 IPR029063 -
Seca8g01440 213 FunFam O-methyltransferase ZRP4 3 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01440 Seca-Chr8 24631182 24633243 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01440 19 213 Monolignol Biosynthesis Gene Families AT1G51990 39.604 7.54e-40 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01440 - K16040 gmx:100781008 333.183