Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01434 ATGGAATTGCACAACGGAGAGCATGCTACCAAACTGCTTCAAGCTCAAAGCCACATATGGAATCACATTTTCAGCTTCATAAACTCCATGTCCCTTAAATGCTTTGTTGACTTAGGGATACCAGATGTCATACACAATTATGGCCAACGCATGCCACTTTCTCAACTCATTGCTTCACTCTCAATCCCCCCATCCAAAACCCACTTCATCTATCGCTTGATGAGAATCATGATTCATTCTGGATTCTTATCTCAACAAAATGTCACTGAGAATGAGTTAGAAGTGGAGTTTATTCTAACTGATGCCTCTATACTACTACTTAAGAATCATCCTTTTAGTGTGACACCTTTCTTACATGCCATGCTCAATCCAATTTTGACAAACCCATGGCATCAATTTTCTACTTGGTTCAAAAATGATGATACTACACCATTTGAAATGACACATGGGATGTTGCTTCGGGATTATGCTTGTCATGAGCCCAAACTTAGCAACCTATTCAATGATGGCATGGCAAGTGATGGTCTATTGGTCTCCGGTGTGATGATGGAGAAGTGCAAGTGGGTATTCAATGGATTAGAGTCATTGGTTGATGTTGGGGGAGGTACAGGGTCACTAACAAAAGCCATTGCTAAATCATTCCCGCAGATGGAGTGTATTGTATTTGATCTACCACATGTTGTTGCTGGCTTGGAAGGAAGTGAGAACCTGAAATATGTTGGTGGAGACATGTTTAAGGCAATTCCTTCTGCTAATGCCATTTTGTTGAAGTGGATATTACACGATTGGAATGATGAGGAATGTATCAACATATTGAAGAAATGCAAGGAGGCGATCACCAACAAAGACAAAGAAGGGAAGGTAATTATCATAGACATGGTCATGGATAATAAGGGAGATAGTAAATCAATTGAAACACAACTCTTCTTTGATATGCTGATGATGGTGTTGGTCCCAGGAAAAGAGAGAAATAAGAAAGAATGGATTAAGTTAATTTCCTCGGCCGGTTTTAATGACTACAAGATAAGTCCAAGTTTGGGCTTAAGATCTCTCATTGAGATTTATCCATAG 1071 0.3959 MELHNGEHATKLLQAQSHIWNHIFSFINSMSLKCFVDLGIPDVIHNYGQRMPLSQLIASLSIPPSKTHFIYRLMRIMIHSGFLSQQNVTENELEVEFILTDASILLLKNHPFSVTPFLHAMLNPILTNPWHQFSTWFKNDDTTPFEMTHGMLLRDYACHEPKLSNLFNDGMASDGLLVSGVMMEKCKWVFNGLESLVDVGGGTGSLTKAIAKSFPQMECIVFDLPHVVAGLEGSENLKYVGGDMFKAIPSANAILLKWILHDWNDEECINILKKCKEAITNKDKEGKVIIIDMVMDNKGDSKSIETQLFFDMLMMVLVPGKERNKKEWIKLISSAGFNDYKISPSLGLRSLIEIYP. 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01434 356 PIRSF O-mtase 1 356 IPR016461 GO:0008168
Seca8g01434 356 PANTHER O-METHYLTRANSFERASE 12 341 IPR016461 GO:0008168
Seca8g01434 356 Pfam O-methyltransferase domain 130 338 IPR001077 GO:0008171
Seca8g01434 356 FunFam Coniferyl alcohol 9-O-methyltransferase 2 106 - -
Seca8g01434 356 Gene3D - 2 106 IPR036388 -
Seca8g01434 356 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
Seca8g01434 356 Gene3D Vaccinia Virus protein VP39 107 356 IPR029063 -
Seca8g01434 356 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 356 IPR016461 GO:0008168
Seca8g01434 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 354 IPR029063 -
Seca8g01434 356 FunFam O-methyltransferase ZRP4 108 356 - -
Seca8g01434 356 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01434 Seca-Chr8 24504047 24506049 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01434 30 342 Monolignol Biosynthesis Gene Families AT5G54160 30.408 3.55e-45 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01434 - K16040 gmx:100781008 570.081