Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01430 ATGCCTTCAACTACTTTTCAATGGCTAAGCCTTGTAGGCATTATTTGGCTCCAAGCTATAAATGGGACAAACACCAATTTTCCTGCTTACTCCTCCCAGCTAAAGCAACTCCTTTCCATGTCCCAAGTGCAGCTCAACAACCTTGCTTTTGCCTCTGATGCAGGCAAACTTTTTGGCTGTTTTTCTGGTATAGCTGCTGTTTACCTCCCACTTTGGCTTGTCCTCATGATTGGTTCAACTCTTGGGTTAATTGGTTATGGTGTGCAATATCTCTTCATAACAAACCAAATTTCCTCTCTGTCCTATTGGCATGTCTTCTTACTAACTGTTCTAGCAGGGAATAGCATTTGTTGGATTAACACTGTTTGCTATGTTGTCACTATAAGGAACTTCTCATCTGATCGCCAAGTTGCTGTGGGGTTAACCACTAGTTACCAAGGATTAAGTGCAAAGATTTATACCAGCATTGTTGATTCTGTTTCTGGACACAAGAAAGCTGCAAACTTTCTCTTTTTAAACTCAATCATACCTGTGATAGTTAGCCTTATTGCAGCTCCTTTAGTCAGAGAAATTGAAGTCACAAGGCCTAAAATTTTAAGTATTGGATTTGTTGTTATGTTTGTTATTACAATTGCCACTGGAATATATGCTGTAGTGAGCAGCTTGCAATTTGTCTCAAGCAAAATATCTCCACTGGGTAACCTTATTGGTATTCTAGTATCCCTTTTGTTCCCTCTATTAGTTCCTGTTTCCATGAAGATAAGTGCACTAGTTGGGTTGTGGCACACAAAAAGAGAAAGACTAAGAGTCTATCATTTAACAGTGGAGAATCAGACCCCAAATGAAGAGAGGACAGATAATGAAGTGAAAGAGGGTGAAAATAACAGAGAAGTTCAAGAAATAGGTATTAGAGAAGAAATTGGAGTGAAGTTGATGATGAGAAGAATAGATTTTTGGTTATATTTCTTTGTCTATTTATTTGGTGCAACACTTGGTTTAGTATTTCTTAATAACTTGGGACAAATAGCTGAATCCAGGGGTTGCTCTGGTACTTCATCTTTGGTTTCTTTGTCTTCCTCTTTTGGGTTCTTTGGCCGTCTCATGCCATCTCTCATGGACTACTTTTACAGGGGTCAGTGTAGAATATCAAGACCAGCTTCAATGGTGGCATTGATGGCTCCAATAGCCGGGGCATTTTTTTTACTTCTCAATAAAACTCACTTAGCACTTTATATTAGCACTGCCATAATTGGAGTGTGCACTGGAGCAATTACTTCTATTTCTGTTTCCACCACCACAGAGCTATTTGGGACAAAGAATTTCTCTGTGAACCACAATGTGCTAGTGGCAAATATTCCAGTGGGATCATTTTTGTTTGGTTACATGGCTGCAATTATTTACCATATGGAAGGGCATGAACATGGGAAATGCATGGGCATGGAATGTTATAGAAATACTTTCATCATATGGGGTTCCCTTTGTTTCTTTGGCACTTTCTTGGCTTTGATTCTACAAGCTAGAACTCGTAAGTTTTACTCACAAAAAGCAATAGAGTAA 1557 0.3886 MPSTTFQWLSLVGIIWLQAINGTNTNFPAYSSQLKQLLSMSQVQLNNLAFASDAGKLFGCFSGIAAVYLPLWLVLMIGSTLGLIGYGVQYLFITNQISSLSYWHVFLLTVLAGNSICWINTVCYVVTIRNFSSDRQVAVGLTTSYQGLSAKIYTSIVDSVSGHKKAANFLFLNSIIPVIVSLIAAPLVREIEVTRPKILSIGFVVMFVITIATGIYAVVSSLQFVSSKISPLGNLIGILVSLLFPLLVPVSMKISALVGLWHTKRERLRVYHLTVENQTPNEERTDNEVKEGENNREVQEIGIREEIGVKLMMRRIDFWLYFFVYLFGATLGLVFLNNLGQIAESRGCSGTSSLVSLSSSFGFFGRLMPSLMDYFYRGQCRISRPASMVALMAPIAGAFFLLLNKTHLALYISTAIIGVCTGAITSISVSTTTELFGTKNFSVNHNVLVANIPVGSFLFGYMAAIIYHMEGHEHGKCMGMECYRNTFIIWGSLCFFGTFLALILQARTRKFYSQKAIE. 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01430 518 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 513 - -
Seca8g01430 518 SUPERFAMILY MFS general substrate transporter 5 191 IPR036259 -
Seca8g01430 518 SUPERFAMILY MFS general substrate transporter 236 510 IPR036259 -
Seca8g01430 518 Gene3D MFS general substrate transporter like domains 229 508 IPR036259 -
Seca8g01430 518 Pfam Nodulin-like 7 250 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01430 Seca-Chr8 24392947 24394976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01430 1 515 Nodulin-like Gene Family AT2G30300 48.387 4.71e-154 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01430 - - gmx:100808034 827.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g01430 8 24392947 24394976 Seca8g01430 8 24392947 24394976 ECH
Seca8g01430 8 24392947 24394976 Seca6g02569 6 89067609 89070049 PCT