Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01425 ATGATTGGATGTTTTGTTTTGTTTATGCAGCGCCGTAAAACCTCTGTAATACTGGATGCATCTGAGTACATACATGGTTTGATGCAAAAGCTGCAGGAATTGAACCAATTAGCAGCTGCTGCAGCCCAAAATATCATTGACTATGGTCCAATGCCTTTGCTTAAAGTTGAACCACAAGAAGAGGGCTTTGTGATTAAGGTGCTGAGTCAAAGGAGTTGCCAGGGGTTGTTGGTGTTCATATTAGAAGCTTTTGAAGGGCTTGGTCTTGAGGTGCTTCAGGCTAGGGTTTCTTGTGTGGATAGCTTCTGTTTAGAAGCAGTTGGAATCAAAGAGAATAATCAAGATTCTCGTCATATGGATGCACAAATAGTTGAGCAAGTAGTGTCACAAGCTATTCAAAATTGGAGGGAAGTTACAAAGCAATATTGA 429 0.4079 MIGCFVLFMQRRKTSVILDASEYIHGLMQKLQELNQLAAAAAQNIIDYGPMPLLKVEPQEEGFVIKVLSQRSCQGLLVFILEAFEGLGLEVLQARVSCVDSFCLEAVGIKENNQDSRHMDAQIVEQVVSQAIQNWREVTKQY. 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01425 142 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 12 135 - -
Seca8g01425 142 Coils Coil 24 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01425 Seca-Chr8 24208227 24209666 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01425 - - aprc:113874442 185.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g01425 8 24208227 24209666 Seca8g01425 8 24208227 24209666 ECH
Seca8g01425 8 24208227 24209666 Seca8g00821 8 10901777 10904287 ECH
Seca8g01425 8 24208227 24209666 Seca6g02002 6 79077159 79079628 ECH
Seca8g01425 8 24208227 24209666 Seca4g10908 4 246685178 246687254 ECH
Seca4g10908 4 246685178 246687254 Seca8g01425 8 24208227 24209666 ECH
Seca8g01425 8 24208227 24209666 Seca6g02561 6 88914683 88916401 PCT