Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01422 ATGGGTGTGCTTCTTGACAAGAATGATGTTGCTTGCATATCTGATTTTGAGTTGTCACTGTTGTTGAACCCTATTCATGGCATTGCAAGATTGGGAGGGTACAAGGCTCGTGAAAAGGTAGAACAGAAGAGGCTGTCACAGCAAGCTCATGTGTACAGTTTTGGGGTGTACCTGTTGGAGGTTCTTATAAGGAGAGCTCCTTCTTTACAGTACCCTTCCCCAGCTTGTCCTCGTATGGATGAAGAGGAGCAAGTCGTGGATCTTTCCAAATGCGTTCGCTTAGTTGTGAAGGAAAAGTGGACTGCAGCAAAATGGATGAAGAACTCCTCTGCTACAAAATGGATGAAGATTTGGGACGAAGGCTAG 366 0.4536 MGVLLDKNDVACISDFELSLLLNPIHGIARLGGYKAREKVEQKRLSQQAHVYSFGVYLLEVLIRRAPSLQYPSPACPRMDEEEQVVDLSKCVRLVVKEKWTAAKWMKNSSATKWMKIWDEG. 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01422 121 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 3 102 - -
Seca8g01422 121 SUPERFAMILY Protein kinase-like (PK-like) 3 72 IPR011009 -
Seca8g01422 121 Gene3D Transferase(Phosphotransferase) domain 1 2 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01422 Seca-Chr8 24086179 24086544 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01422 3 102 Receptor kinase-like Gene Family AT2G36570 65.421 1.30e-32 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Seca8g01422 PK_Tyr_Ser-Thr 3.7e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01422 - - fve:101311589 147.132