Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01410 ATGGAATCCAACAAAAATGAGGATGTTGCCAAACTGCTTCGAGCTCAAACCTATATATGGAATCACATTTTTGGCTTCATAAGCTCCATGTCCCTTAAATGTATTGTTGACTTAGGCATACCAGATGCCATACACAACTATGGCCAACCCATGCCACTCTCTCAACTTATTGCTTCATTACCGATCCACCCATCCAAAACCCATCTTATCTATCGCTTGATGCGAATCATGAGTCATTCTGGCTTCTTCTCTCAAAAAACTTTTACTGAGAATGAGCTAGAAGTGAAGTTAAAAAATGATGATCTGACAACATTTCAAACAACACACGGGATGTCGTTTTGGGAGTATGCCAATCGCAAGCCGATATATAATAACTTATTCAATGATGGCATGGAAAGTGATGCTCGATTAGTCATTAGTGTGGTGATGGAGAAGTGCAATGAGGTATTTAATGGAGTGGTGTCATTAGTTGATGTTGGAGGAGGCACAGGGACTATGGCAAAGGTCATTGCTAAATCATTCCCAAAGATGGTGTGCATTGTATTTGATCTGCCACATGTTGTTACTGGCTTGGAAGGAAGTGAGAACCTAAAATATGTTAGTGGGGACATGTTTAAGGCAATTCCTCCTGCAGACACCATTCTATTAAAGTGGATAATGCATGAATGGAATGATGAGGAATGTTTGAAGATATTGAAGAAATGCAAGGAAGCGATGAAGATAAAAGGCAAAGAAGGGAAGGTGATTATCATAGACATGGTGATGGATAATGGGATGGAAGACGATGAATCAGTTGAATTGAAACACAACTTTTCTTTGATATGA 825 0.3939 MESNKNEDVAKLLRAQTYIWNHIFGFISSMSLKCIVDLGIPDAIHNYGQPMPLSQLIASLPIHPSKTHLIYRLMRIMSHSGFFSQKTFTENELEVKLKNDDLTTFQTTHGMSFWEYANRKPIYNNLFNDGMESDARLVISVVMEKCNEVFNGVVSLVDVGGGTGTMAKVIAKSFPKMVCIVFDLPHVVTGLEGSENLKYVSGDMFKAIPPADTILLKWIMHEWNDEECLKILKKCKEAMKIKGKEGKVIIIDMVMDNGMEDDESVELKHNFSLI. 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01410 274 Gene3D - 1 110 IPR036388 -
Seca8g01410 274 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 99 267 IPR029063 -
Seca8g01410 274 PANTHER O-METHYLTRANSFERASE 24 274 IPR016461 GO:0008168
Seca8g01410 274 CDD AdoMet_MTases 156 255 - -
Seca8g01410 274 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 274 IPR016461 GO:0008168
Seca8g01410 274 FunFam Coniferyl alcohol 9-O-methyltransferase 2 104 - -
Seca8g01410 274 Pfam O-methyltransferase domain 98 267 IPR001077 GO:0008171
Seca8g01410 274 Gene3D Vaccinia Virus protein VP39 112 274 IPR029063 -
Seca8g01410 274 SUPERFAMILY "Winged helix" DNA-binding domain 11 86 IPR036390 -
Seca8g01410 274 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01410 Seca-Chr8 23774508 23776031 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01410 30 255 Monolignol Biosynthesis Gene Families AT5G54160 28.625 3.94e-36 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01410 - K16040 gmx:100781008 386.341