Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01407 ATGGAATCCCACAAAAATGAGGATGTTGCCAGACTGCTTCGAGCTCAAACCCATATATGGAATCACATTTTTGGCTTCATAAGCTCCATGTCCCTTAAATGCATTGTTGACTTAGGCATACCCGATGTCATACACAACTATGGACAACCCATGCCACTCTCTCAACTTATTGCTTCACTACCGATCCACCCATCCAAAACCCATCTTATCTATCGCTTGATGCGAATCATGAGCCATTCTGGCTTCTTCTCTCAAAAAACTTTTACTGAGAATGAGCTAGAAGTGGAGTATGCGCTAACTGATTCATCTACACTACTTCTTAAGAACCATCCTTTAAGTGTAACACCTTTCTTGAATGCCATGATTAACCCAATTTTTATAAACTCGTGGCATCAATGGTCTACTTGGTTAAAAAACGATGATCCGACAACATTTCAAACAATACACGGGATGTCATTTTGGGAGTATGCCAATCGTCAGCCGATATATAATAACTTATTCAATGATGGCATGGAAAGTGATGCTCGATTAGTCATCAGTGTGGTGATGGAGAAGTGCAATGAGGTATTTAATGGAGTGGAGTCATTGGTTGATGTTGGGGGAGGCACAGGGACTATGGCAAAGGTCATTGCTAAATCATTCCCAAAGATGGAGTGCATTGTATTTGATCTGCCACATGTTGTTACTGGCTTGGAAGGAAGTGAGAACCTAAAATATATTAGTGGGGACATGTTTAAGGCAATTCCTCCTGCAGACACCATTCTATTGAAGTGGATAATGCATGAATGGAATGATGAGGAATGTTTGAAGATATTGAACAAATGCAAGGAAGCGATGAAGATCAAAGGCAAAGAAGGGAAGGTGATTATATTAGATATTATCATAGACATGGTCATGGATAATGGGATGGAAGACGATGAATCAGTTGAAACACAACTTTTCTTTGATACGATGACGATGGTGATGTTAAATGGAAAAGAAAGAAATAAGAAAGAATGGGATAAGTTGATTTCCTCTGCCGGTTTCAGAGATTTCAAGATAACTCCAATTTTGGGCTTAAGGTCTCTCATTGAGATTTATCCGTAG 1086 0.395 MESHKNEDVARLLRAQTHIWNHIFGFISSMSLKCIVDLGIPDVIHNYGQPMPLSQLIASLPIHPSKTHLIYRLMRIMSHSGFFSQKTFTENELEVEYALTDSSTLLLKNHPLSVTPFLNAMINPIFINSWHQWSTWLKNDDPTTFQTIHGMSFWEYANRQPIYNNLFNDGMESDARLVISVVMEKCNEVFNGVESLVDVGGGTGTMAKVIAKSFPKMECIVFDLPHVVTGLEGSENLKYISGDMFKAIPPADTILLKWIMHEWNDEECLKILNKCKEAMKIKGKEGKVIILDIIIDMVMDNGMEDDESVETQLFFDTMTMVMLNGKERNKKEWDKLISSAGFRDFKITPILGLRSLIEIYP. 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01407 361 Gene3D Vaccinia Virus protein VP39 107 361 IPR029063 -
Seca8g01407 361 PIRSF O-mtase 1 361 IPR016461 GO:0008168
Seca8g01407 361 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
Seca8g01407 361 PANTHER O-METHYLTRANSFERASE 13 344 IPR016461 GO:0008168
Seca8g01407 361 Pfam O-methyltransferase domain 130 343 IPR001077 GO:0008171
Seca8g01407 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 359 IPR029063 -
Seca8g01407 361 FunFam O-methyltransferase ZRP4 108 361 - -
Seca8g01407 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 361 IPR016461 GO:0008168
Seca8g01407 361 SUPERFAMILY "Winged helix" DNA-binding domain 11 111 IPR036390 -
Seca8g01407 361 FunFam Coniferyl alcohol 9-O-methyltransferase 2 106 - -
Seca8g01407 361 Gene3D - 1 106 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01407 Seca-Chr8 23581832 23586641 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01407 30 347 Monolignol Biosynthesis Gene Families AT5G54160 29.193 1.22e-48 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01407 - K16040 gmx:100781008 553.903