Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01404 ATGTTAAATTTAATTTCATCGATAGTTCAGGAAACAAGTTATATGGAATCACATAATAGTGAGGATGTTGCCAAAATGCTTCGAGCTCAAACCCATATATGGAATCATGTTTTTGGTTTCATAAGATCCATGTCCCTTAAATGCATTGTTGACTTAGGCATACCAGATGCCATACACAACTATGGCCAACCCATGCCACTCTCTCAACTCATTGCTTCACTACCGATCCACCCATCCAAAACCCATTTTATCTTTCGCTTGATGCGAATCATGACCCATTCTGGCTTCTTTTGTCAACAAAATTTAACTGAGAATGAGCTAGAAGTGGAGTATGTGCTAACTGATTCATCTACATTACTTCTTAAGAACCATCCTTTAAGTGTGGCACCTTTGTTGAATGTCGCAATTGATCCAATTTTGACAAACCCATGGCATCAATGGTCTTCTTGGTTCAAAAATGATGATCCTACACCATTCCAAACAACTTACGGGATGCCAATTTGGGAGTATGCTGGTCATGAGCCGAAATTTAATAACTTATTCAATGATGGCATGGAAAGTGATGCTCGGTTAGTTATCAGTGTGGTGATGGAAAAGTGCAAGGGAGTATTCAATGGATTGGGGTCATTGGTTGATGTTGGGGGAGGCACAGGGACCATAGCAAAGGCCATTGCTAAATCATTCCCAAAGATGGAGTGCATTGTATTTGATCTACCACATGTTATTACTGGCTTGGAAGGAAGTGATAACCTAAAATATGTTGATGGGGATATGTTTAAGGCAATTCCTCCCGCAGATGCCATTTTGTTGAAGTTGACAAAGCAGTGCATAATGCATGACTGGAATGATGAGGAATGTATGAAGATATTGAAGAAATGTAAGGAAGCAATCACATGCAAAGGAAAAGAAGGGAAGGTGATTATCATAGACACGGTGATGGAGAATGAGAAGGGAGATGATAAATCAGTTGAAACACAACTTTTCCTTGATATGTATATGATGGTGGTGGTAAGTGGAAAAGAGAGAAACAAGAAAGAATGGGATAAGTTGATTTCCTCTGCCAGTTTTAGAGATTTCAAAGTAACTCCAGTTTTAGGCTTAAGGTCTCTCATTGAGATCCATCCGTAG 1128 0.3936 MLNLISSIVQETSYMESHNSEDVAKMLRAQTHIWNHVFGFIRSMSLKCIVDLGIPDAIHNYGQPMPLSQLIASLPIHPSKTHFIFRLMRIMTHSGFFCQQNLTENELEVEYVLTDSSTLLLKNHPLSVAPLLNVAIDPILTNPWHQWSSWFKNDDPTPFQTTYGMPIWEYAGHEPKFNNLFNDGMESDARLVISVVMEKCKGVFNGLGSLVDVGGGTGTIAKAIAKSFPKMECIVFDLPHVITGLEGSDNLKYVDGDMFKAIPPADAILLKLTKQCIMHDWNDEECMKILKKCKEAITCKGKEGKVIIIDTVMENEKGDDKSVETQLFLDMYMMVVVSGKERNKKEWDKLISSASFRDFKVTPVLGLRSLIEIHP. 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01404 375 CDD AdoMet_MTases 210 312 - -
Seca8g01404 375 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 34 375 IPR016461 GO:0008168
Seca8g01404 375 Pfam Dimerisation domain 44 91 IPR012967 GO:0046983
Seca8g01404 375 FunFam Coniferyl alcohol 9-O-methyltransferase 16 120 - -
Seca8g01404 375 PIRSF O-mtase 10 375 IPR016461 GO:0008168
Seca8g01404 375 FunFam O-methyltransferase ZRP4 122 375 - -
Seca8g01404 375 SUPERFAMILY "Winged helix" DNA-binding domain 25 125 IPR036390 -
Seca8g01404 375 Pfam O-methyltransferase domain 144 357 IPR001077 GO:0008171
Seca8g01404 375 Gene3D Vaccinia Virus protein VP39 121 375 IPR029063 -
Seca8g01404 375 PANTHER O-METHYLTRANSFERASE 25 356 IPR016461 GO:0008168
Seca8g01404 375 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 126 372 IPR029063 -
Seca8g01404 375 Gene3D - 15 120 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01404 Seca-Chr8 23517626 23519292 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01404 44 361 Monolignol Biosynthesis Gene Families AT5G54160 33.746 1.09e-52 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01404 - K16040 gmx:100781008 562.377