Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01400 ATGGCCTTTCACCAACGTGGTGACATAATATTTTCCTTATTCTTGTTTTTGGTGTTTGGTGGTTTAGGGTCTTGTGATCTAACCTCAGATTGTTATAGAACAACATGCCCACAAGCCCTCTCTATCATCAGATCCGCAGTGATCAACGCAGTTGCCAAAGAACACCGCATGGGCGCCTCCTTGCTCCGTCTTCATTTCCATGATTGTTTCGTCAATGGATGTGATGCATCTGTTCTATTAGATGACACTTCTAGCTTTACTGGAGAGAAGTCAGCTGGTGCAAATGTGAATTCTCTGAGAGGTTTTGAAGTAATTGATGACATCAAAGCTAAAGTGGAGGCTGCTTGTCCCGGAGTTGTTTCTTGTGCTGATATTCTAGCTATTGCTGCTCGTGATTCTGTTGTTGCTCTGGGAGGTCCATCATGGAATGTTGCGTTAGGCAGAAGAGATTCAACCACAGCAAGTAAAGATGCTGCCACCAAGGATATCCCATCCCCACTAATGGATCTTAGTGCCCTTATATCTGCTTTTGCACAGAAGGGCTTTAACACTCAGGAAATGGTAGCCCTTGCAGTCTCTCTCTCAAATTTTCATGTATATATAGGAGCTCACACAACAGGGCAAGCCAGGTGTCAGTTATTCAGAGGCAGGCTTTATAATGAAACAAACATAGAGTCAAATTTTGCAACATCACTCAAGCCAAACTGTCCAAGCTCTAGTGGTGATAGTAACCTTTCCCCACTTGATGTCACCACCAGTGTGATATTTGACAATGCTTATTTCAAGAATTTGATTAACAAAAAGGGACTTCTACATTCAGATCAACAGTTATTCAGTGGTGGTTCTACAGACTCTCAGGTCACTACATATAGCAATGACCCTGCAGCTTTCTATGCAGACTTTGCTAGTGCCATGGTGAAAATGGGAAACCTTAGCCCTCTAACAGGGAAAAGTGGCGAGATTCGTACTAACTGCCACAAAGTTAACTAA 990 0.4293 MAFHQRGDIIFSLFLFLVFGGLGSCDLTSDCYRTTCPQALSIIRSAVINAVAKEHRMGASLLRLHFHDCFVNGCDASVLLDDTSSFTGEKSAGANVNSLRGFEVIDDIKAKVEAACPGVVSCADILAIAARDSVVALGGPSWNVALGRRDSTTASKDAATKDIPSPLMDLSALISAFAQKGFNTQEMVALAVSLSNFHVYIGAHTTGQARCQLFRGRLYNETNIESNFATSLKPNCPSSSGDSNLSPLDVTTSVIFDNAYFKNLINKKGLLHSDQQLFSGGSTDSQVTTYSNDPAAFYADFASAMVKMGNLSPLTGKSGEIRTNCHKVN. 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01400 329 ProSiteProfiles Plant heme peroxidase family profile. 26 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g01400 329 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g01400 329 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g01400 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g01400 329 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g01400 329 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g01400 329 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g01400 329 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g01400 329 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g01400 329 CDD secretory_peroxidase 27 328 IPR033905 GO:0004601|GO:0042744
Seca8g01400 329 PANTHER PEROXIDASE 72-RELATED 25 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g01400 329 SUPERFAMILY Heme-dependent peroxidases 27 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca8g01400 329 Gene3D Peroxidase, domain 2 164 308 - -
Seca8g01400 329 FunFam Peroxidase 30 169 - -
Seca8g01400 329 FunFam Peroxidase 164 308 - -
Seca8g01400 329 Pfam Peroxidase 44 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g01400 329 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Seca8g01400 329 Gene3D - 32 325 - -
Seca8g01400 329 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Seca8g01400 329 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g01400 329 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g01400 329 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g01400 329 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g01400 329 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01400 Seca-Chr8 23353055 23355721 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01400 27 329 Peroxidase AT5G05340 62.951 6.81e-138 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01400 K00430 - gmx:100794128 541.191