Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01393 ATGGCACTTTCTTGCTCTAAATCTTCTTCTTTCTCATCATCACCAACCAATTTTGCCTTAGCTTTGTTGATGTTTTTGCTTATAGGGAGTTCCTCTGCTCAACTCTCTGAGAACTTCTATGTTAAGAGGTGTCCTAAGGTTTTCAATGCTGTCAAATCTGTTGTTCAATCAGCTGTAGCTAAAGAACCTCGCATGGGAGCATCTCTTCTTCGCCTCTTCTTTCATGACTGCTTTGTCAATGGTTGTGATGGGTCAGTACTACTTGATGACACTTCTTCCTTCAAAGGAGAGAAGACTGCACCTCCTAACAATCATTCTTTGAGAGGTTTTGAAGTCATTGATGCCATAAAGTCTAAGGTGGAGGCAGTATGCCCTGGTGTGGTGTCATGTGCTGATATTGTAGCAATTGCTGCTCGTGACTCTGTTGCAATTCTTGGAGGGCCTTATTGGAAGGTTAAACTTGGAAGAAGGGATTCCAAGACAGCTAGCTTCAAAGTTGCAAGCAGTGGTGTGATTCCATCTCCCTTTGCTACCCTTAGCAATCTTATCTCACGTTTTCAAGCACAAGGGCTCTCTACCAAGGACATGGTTGCCTTATCCGGAGCCCACACAATTGGGAAGGCAAGATGTGTAACTTTCAAATCGCGTGTATACAATGATACCAACATTAATAGGTTATTTGCAAAAGCAAGGCAAAGGAGCTGTCCAAGGACTAATGGCACACCAAGAGACAACAATGTAGCAGTCCTAGACTTCAAAACTCCCAACCATTTTGATAACATGTACTACAAAAACCTCATCAACAAAAAAGGTCTCCTTCATTCTGACCAAGTGCTCTTCAATGGAGGGTCTACTGATTCATTGGTTAGAACTTATAGCAATAATCCTAAGGCATTTGTCTCTGACTTTGTTATTGCAATGATTAAGATGGGAAATATCAAACCTTTAACTGGGTCAAAAGGGCAGATTCGGAAGCATTGCAGGAGACCTAATTAG 996 0.4187 MALSCSKSSSFSSSPTNFALALLMFLLIGSSSAQLSENFYVKRCPKVFNAVKSVVQSAVAKEPRMGASLLRLFFHDCFVNGCDGSVLLDDTSSFKGEKTAPPNNHSLRGFEVIDAIKSKVEAVCPGVVSCADIVAIAARDSVAILGGPYWKVKLGRRDSKTASFKVASSGVIPSPFATLSNLISRFQAQGLSTKDMVALSGAHTIGKARCVTFKSRVYNDTNINRLFAKARQRSCPRTNGTPRDNNVAVLDFKTPNHFDNMYYKNLINKKGLLHSDQVLFNGGSTDSLVRTYSNNPKAFVSDFVIAMIKMGNIKPLTGSKGQIRKHCRRPN. 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01393 331 CDD secretory_peroxidase 34 329 IPR033905 GO:0004601|GO:0042744
Seca8g01393 331 SUPERFAMILY Heme-dependent peroxidases 34 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca8g01393 331 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g01393 331 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g01393 331 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g01393 331 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g01393 331 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g01393 331 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g01393 331 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g01393 331 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g01393 331 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g01393 331 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601
Seca8g01393 331 Gene3D - 38 328 - -
Seca8g01393 331 Gene3D Peroxidase, domain 2 173 310 - -
Seca8g01393 331 PANTHER PEROXIDASE 72-RELATED 29 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g01393 331 FunFam Peroxidase 173 310 - -
Seca8g01393 331 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g01393 331 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g01393 331 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g01393 331 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g01393 331 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g01393 331 ProSiteProfiles Plant heme peroxidase family profile. 34 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g01393 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
Seca8g01393 331 FunFam Peroxidase 38 174 - -
Seca8g01393 331 Pfam Peroxidase 51 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01393 Seca-Chr8 23159609 23163163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01393 18 331 Peroxidase AT5G58400 64.968 6.94e-151 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01393 K00430 - gmx:100812478 508.064