Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01387 ATGGCACTTTCTTCTCCTAGATCTTCTTTTTTCTCTTCACAAGCCATTTTTGCTTTAGCTTTGATGATGTTTTTGCTTATAGGAAGTTCCTCAGCTCAACTCTCTGAGAATTTCTATGTTAAGAGGTGTCCCAATGTTTTGAATGCTGTGAAATCTGTTGTTCAATCTGCTGTGGCTAAAGAACCTCGCATGGGAGCTTCTCTCCTTCGCCTCTTCTTTCATGATTGCTTTGTCAATGGTTGTGATGGATCAATACTTCTTGATGACACTTCTTCCTTCAAAGGAGAGAAGACTGCACCTCCCAACAAGCAATCTGTGAGAGGCTATGAAGTCATTGATGCCATCAAATCTAAGGTGGAGGAAGTATGCCCTGGTGTAGTGTCATGTGCTGATATTGTAGCAATTGCTGCTCGTGACTCTGTTGTCATTCTTGGAGGGCCATTTTGGAAGGTTAAACTTGGAAGAAGGGATTCAAACACAGCCAGTTTCCAAACTGCAATCAATGTGCTTCCATCTCCCTCTTCTAGCCTTAGCACTCTTATCTCAAAATTTGAAGATCAAGGGCTCTCTACCAAGGACATGGTTGCCTTATCCGGAGCCCACACAATTGGAAAGGCAAGATGTTCTAGTTACAAAACACGTGTATACACTGATACCAACATTGACAAGTCATTTGCAAAGGCAAGGCAGAGGAACTGTCCAAGGATTAATGACACAGCAAGAGACAATAATGTAGCAGTCCTAGACTTCAAAACTCCCAATCACTTTGACAACATGTACTACAAGAACCTCATCAACAAAAAGGGACTCCTTGATTCCGATCAGGTTCTCTTCAATGGAGGGTCTACTGATTCATTGGTTATAACTTACAGCAACAATCCCAAGGCATTTGAATATGACTTTGTTACTGCAATGATTAAGATGGGAGACATCCAACCTTTAACTGGGTCAAATGGGCAGATTAGGAAGCAGTGCAGGTTTCCTAATTAG 990 0.4182 MALSSPRSSFFSSQAIFALALMMFLLIGSSSAQLSENFYVKRCPNVLNAVKSVVQSAVAKEPRMGASLLRLFFHDCFVNGCDGSILLDDTSSFKGEKTAPPNKQSVRGYEVIDAIKSKVEEVCPGVVSCADIVAIAARDSVVILGGPFWKVKLGRRDSNTASFQTAINVLPSPSSSLSTLISKFEDQGLSTKDMVALSGAHTIGKARCSSYKTRVYTDTNIDKSFAKARQRNCPRINDTARDNNVAVLDFKTPNHFDNMYYKNLINKKGLLDSDQVLFNGGSTDSLVITYSNNPKAFEYDFVTAMIKMGDIQPLTGSNGQIRKQCRFPN. 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01387 329 Gene3D - 37 326 - -
Seca8g01387 329 FunFam Peroxidase 171 308 - -
Seca8g01387 329 Pfam Peroxidase 50 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g01387 329 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g01387 329 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g01387 329 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g01387 329 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g01387 329 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g01387 329 ProSiteProfiles Plant heme peroxidase family profile. 33 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g01387 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Seca8g01387 329 SUPERFAMILY Heme-dependent peroxidases 33 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca8g01387 329 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601
Seca8g01387 329 FunFam Peroxidase 37 178 - -
Seca8g01387 329 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g01387 329 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g01387 329 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g01387 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g01387 329 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g01387 329 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g01387 329 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g01387 329 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g01387 329 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g01387 329 PANTHER PEROXIDASE 72-RELATED 28 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g01387 329 Gene3D Peroxidase, domain 2 171 308 - -
Seca8g01387 329 CDD secretory_peroxidase 33 327 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01387 Seca-Chr8 23101735 23105551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01387 14 329 Peroxidase AT5G58400 63.722 1.64e-147 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01387 K00430 - gmx:100812478 472.626