Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01371 ATGGGTAACAACAGGTTCAGATTGTCAGATATGATACCAAATGCTTGGTTTTACAAGCTAAAAGATATGAGCAGATCAAGGAAGAGAAATGGTCCTCATGTTATGAAGAGCAAAGCAACCTCACCAACAACATCTCAAAGGTCACTGCCAAGATATTCACACTATTTCTCCACTGAACCAATCAGAGCTGGTAAGCTATACAACACTCCCATTCACACCAAAGACTTTGACATCCCATTCAATGATTCACCAAGAAGGTCATCCAAGAGAAGGTCTAGGAGAAAAACCATTTACAAGCCTTCTCCTTCAGTTGTTTCTTCCTCTTTCATAGCTAATTCCAACTATGATTCCACAAATAATTGGACTAAGCCAGATCAAATTCAGTCACCAGATTATGAGTTGTCTTCCATTGAAAGTTCTTCTGAATCTGATCTCCATGAATATGTTTATTCTGAGTCTGATTGTGATAGCTTTTCTGTTCCTGATTTGCTTAATGGAATAGCCCCTGATTGCAGTTGTAGAGTTAGCTCTTCAACTAATGACATCATCATTGACATGAACAATGAATCCTTCCCTGGAAATTCAGAAAAGCTAGATGGGTTTGATACAATTTCACAGCTTGGTCTAGCTCCAATTTTGACAAAGCCAGTGAAGTTTGATGATAAGGTCATTGAAGCCAAAGAATCTAGGAGCTCAACTTCAACTGAATTGGATGATGATGATTTTCAGATTGATCAGTCTTTCTCCATCAAAATTAGCAAAGAGGAAAGCAGTAGAACTCAAAGAAGGAGAAAAAGCAGTCACATAGCTAGAAAGTCCTCTCCTAATTCTACAGGCATAAGGCTTAGAATCAATTCTCCAAAACTAGCAAGCAGAAAAATTCAAGCCTGTGCAAGAAGGAGTGTGTCATCTAGTGCAAACAAAGCTTCAAAGAATGCAGGATTTCCAGATGGATTTGCTGTTGTTAAGTCCTCATTTGATCCACAAAGTGACTTCAGGGAGTCAATGGTGGAGATGATTGTGGAGAACAATATCCGGGCATCAAAAGATTTGGAGGATTTACTTGCCTGTTATCTTTCCCTCAATTCAAGTGAATACCATGATATCATTGTTAAAGCATTTGAGCAAATTTGGTATGACATGGCTCAACTCAGAATGTAA 1161 0.385 MGNNRFRLSDMIPNAWFYKLKDMSRSRKRNGPHVMKSKATSPTTSQRSLPRYSHYFSTEPIRAGKLYNTPIHTKDFDIPFNDSPRRSSKRRSRRKTIYKPSPSVVSSSFIANSNYDSTNNWTKPDQIQSPDYELSSIESSSESDLHEYVYSESDCDSFSVPDLLNGIAPDCSCRVSSSTNDIIIDMNNESFPGNSEKLDGFDTISQLGLAPILTKPVKFDDKVIEAKESRSSTSTELDDDDFQIDQSFSIKISKEESSRTQRRRKSSHIARKSSPNSTGIRLRINSPKLASRKIQACARRSVSSSANKASKNAGFPDGFAVVKSSFDPQSDFRESMVEMIVENNIRASKDLEDLLACYLSLNSSEYHDIIVKAFEQIWYDMAQLRM. 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01371 386 MobiDBLite consensus disorder prediction 253 282 - -
Seca8g01371 386 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 144 381 IPR038933 GO:0045892
Seca8g01371 386 MobiDBLite consensus disorder prediction 27 52 - -
Seca8g01371 386 MobiDBLite consensus disorder prediction 77 100 - -
Seca8g01371 386 Pfam Transcriptional repressor, ovate 325 381 IPR006458 -
Seca8g01371 386 MobiDBLite consensus disorder prediction 36 52 - -
Seca8g01371 386 NCBIfam uncharacterized plant-specific domain TIGR01568 319 381 IPR006458 -
Seca8g01371 386 ProSiteProfiles OVATE domain profile. 321 380 IPR006458 -
Seca8g01371 386 Pfam DNA-binding domain 1 46 IPR025830 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01371 Seca-Chr8 22856734 22857894 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Seca8g01371 Ovate 1.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01371 - - gmx:100780926 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g01371 8 22856734 22857894 Seca8g01371 8 22856734 22857894 ECH
Seca8g01371 8 22856734 22857894 Seca6g02530 6 88602538 88603680 PCT