Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01358 ATGCAGGATCCACCTTCAAACCCTAATTCCTTTCCCAATTCCAATTTCAATTCCAATCTTCACAATGCCAATACCGCTTCACAATTACCGCCGGCGCCGCCGTCCACGGCTGCGACCACCTCAGTCGCCGGCGTCTCCTCGTCATCGTCTTCGTTGTTCGTGCGCTCCGGCGGCAATGGCGGTTCCCACCACCGGAGGGCTCACTCGGAGGTCAGTTTCCGGTTGCCGGACGACATGATGGACCTATCGCCGTCCGATCCGTTCACCGGCGGGTCGTCGACGGCGAGCCTGGAAGAGATCGGATCCGAAGATGACCTGTTCTCTACGTACATTGATGTGGACAAACTCGGAGGTTCGAACGGTGCCGGAAACGGATCGGATCCGGGTGGGAACGGTGAACTGGAGAAGAGCCCTGCGAGGCCGAGGCACAGGCATAGTAGCTCTGTCGATGGTTCTTCGTCGTTTGGGGAGATTATGGATGCGAAGAAAGCTATGCCTCCTGATAAGTTAGCTGAGCTATGGACAATTGATCCCAAGCGGGCTAAGAGAATACTTGCAAATCGGCAATCTGCTGCTCGTTCAAAAGAGAGAAAGGCCCGCTATATACAAGAACTTGAGCGCAAAGTCCAAACCCTTCAGACTGAAGCTACAACTCTTTCTGCCCAACTGACACTATACCAGAGGGACACAACAGGTCTGAGTACTGAAAATACAGAGCTTAAGCTCCGCCTGCAAGCCATGGAACAACAAGCACAGCTTCGTGATGCTCTTAATGAAGCACTGAAGAAGGAAGTTGAGAGGCTTAAGATTGCTACCGGTGACATAATGAGCCACACTGAATCTTTTAATCTGGGAATGCACCAGGTGCCATTTACAGTATCAAATTTCATGCCAATCCCACCACAATCAGGTCCTGCTGGTCATCAGAACATCCACTTGCCACCATTTGGTCACTCCCCATCTAGCATGCCAAGTCATCAACTACAACAAACAAATTCTCATCCACTTTCAGAAATACTGCAAAATGACCAGCTTGGTCGTTTGCAAGGGCTTGACATCAGTAGCAAAGGACCAACTGTCGTGAAGTCTGAAGGCCCCTCACTTTCTGCTAGTGAGAGTAGCACTACATTTTGA 1134 0.5088 MQDPPSNPNSFPNSNFNSNLHNANTASQLPPAPPSTAATTSVAGVSSSSSSLFVRSGGNGGSHHRRAHSEVSFRLPDDMMDLSPSDPFTGGSSTASLEEIGSEDDLFSTYIDVDKLGGSNGAGNGSDPGGNGELEKSPARPRHRHSSSVDGSSSFGEIMDAKKAMPPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKIATGDIMSHTESFNLGMHQVPFTVSNFMPIPPQSGPAGHQNIHLPPFGHSPSSMPSHQLQQTNSHPLSEILQNDQLGRLQGLDISSKGPTVVKSEGPSLSASESSTTF. 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01358 377 MobiDBLite consensus disorder prediction 360 377 - -
Seca8g01358 377 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 30 347 - -
Seca8g01358 377 Gene3D - 178 230 - -
Seca8g01358 377 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 177 240 IPR004827 GO:0003700|GO:0006355
Seca8g01358 377 MobiDBLite consensus disorder prediction 1 96 - -
Seca8g01358 377 Coils Coil 195 222 - -
Seca8g01358 377 CDD bZIP_plant_RF2 180 229 IPR044759 GO:0003700|GO:0006355
Seca8g01358 377 FunFam probable transcription factor PosF21 178 231 - -
Seca8g01358 377 MobiDBLite consensus disorder prediction 300 333 - -
Seca8g01358 377 MobiDBLite consensus disorder prediction 350 377 - -
Seca8g01358 377 MobiDBLite consensus disorder prediction 118 155 - -
Seca8g01358 377 SUPERFAMILY Leucine zipper domain 179 230 IPR046347 GO:0003700|GO:0006355
Seca8g01358 377 Coils Coil 243 267 - -
Seca8g01358 377 SMART brlzneu 175 239 IPR004827 GO:0003700|GO:0006355
Seca8g01358 377 MobiDBLite consensus disorder prediction 1 57 - -
Seca8g01358 377 Pfam bZIP transcription factor 179 234 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01358 Seca-Chr8 22462035 22465215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01358 61 377 bZIP Transcription Factor Family AT2G40620 53.463 9.46e-105 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca8g01358 bZIP_1 6.4e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01358 - - gmx:100815680 494.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g01358 8 22462035 22465215 Seca8g01358 8 22462035 22465215 ECH