Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01353 ATGTTTAATAGTTCTGATGAAGCTTATGAATTTTACCATGCTTTTGCACGAAAAAATGGCTTTTCGATTAGACGTGACCATACTTACAAATCTAGTAAGAATGAGTCTGAGGATAATCCTTTGGGTATTTATAAAAGAAAGTTTGTTTGTCATCGTGGTGGTTCTGCTAAACAACGCAAAGTTATTGAAGAGGAAAGTCAAAGAAAACGGAAAAGTTCAAGATGCAATTGTGGTGCAAAAATGTTGATTAACAAAAATACAATTGGCTTTGAGGAAAAATGGGTGGTTAAATATTTTTATAATAACCACAACCATGAGTTATTAGATGATAAAGAGGTTCAATTTCTTCCGACTTATCGAAACATCTCAATTGTTGATAAAGATCGTATACTATTATTGTCGAAAGCCGGTTGCCCTGTAAGCCTCATAATAAGAGTGCTTGAGTTAGAGAAAGGAATAGATCCAGGAAATCTACCATTTTTAGAGAAGGATATTAGGAATTTTATTCAATCTCAGAGTAGTATTGGTAAAGAAAATGATGCTTCAGATGTTCTCAAATTGTGCAAAAGTTTGAAAGATAGAGACGATGCCTTCCAATATGATTTCACCCTAGATGAAAATAACAAATTGGAGCATATTATTTGGGCATTTGGTGATTCAATTCAAGCATATGAGGTTTTTGGAGATGTGGTTGTTTTTTATACCACATATCGAATAAATCGTTATGATATGCCTCTTGGATTATGGGTTGGGGTTGATAATCATGGGAATTCAATTTTTTTCGGTTGTGTTCTATTACGAAATGAGAAGCTCTCTTCCTTCACATGGGCTCTAAAGAGTTTTCTATATTTTGTCAAAGGCAAATGTCCACAAACAATTCTTACTGATCAAGATCTTGCACTCAAGGAAGCTATCTCAATGGAATTTCCGAACACAAAACATGCATTTTGCATATGGCATATTGTGGCAAAGTTATCAAGTTGGTTTTCCTTTCCATTGGGTTCGAGATATAATGAATTCAAATCTGAGTTTTATAGGTTGTACCATTTAGAATGTGCAAATGATTTTGAGCGAGAATGGAACTTGATGGTCTCACAATTCGGTCTAAGTATGGATAGGCATATTGACTTGCTCTATTCCCATCGTCAATTTTGGGCCCTAGCCTATTTGAAGGAGTTCTTTTTTGCTGGGATGACAACAACTGGGCGTTCAGAATCTATAAATTCATATATAAAAAGATTTTTGGATGTCAAAACGAGTTTGATAGATTTTGTAAATCAAGTTGGTGTTGCTGTCAACATTAGAAATCAAGCTGGAGAGGAGGCAAGAATGCGTCAAAAGTACCACAACCATCAAATTAGAACAGGCTTTCCTCTTGAGGAACATGTTGCATCTATTTTCACACCATATGCCTTTGAGCTGCTCCAACAGGAGATCCAGCTATCTACAAAATATGCAGCAATTGAAGCTGGAAATGACTCATACATAGTGCAGCATCATACCAAAGTTGATGGAGGTCGTTCTTCTCTAGTTCGATGTTTGGAAGTTGAATCTTTGAAGACAAAAGATCGAGTTGAAGTCGCTACTAAAGAGTTAGGGAATGTCATTCAAATCATAAAATCCATGCCTGAGATTCAAGAAAAATCAACTGAGATGGAACATGATGTACCAAATCACAGTGGCTGTGAGGTTGAAGTTGAAAATCCCATCATTTCTAAAACAAAAGGTAGACCGAAAGGATCAAGGCCAAAAGGAGGAGTTGAAGTTGCAAAAAAGCCTCGTCGTTGTCATTATCCTAATTGTGGTGGAACTAATCATGATTCGCGAAATTGTCCAAACAAAAAGAATAACATTGAGATATTGCCTTCTCAATCTCCTAATAAGTATGTGTTATCCATATATATTGATTAA 1911 0.3564 MFNSSDEAYEFYHAFARKNGFSIRRDHTYKSSKNESEDNPLGIYKRKFVCHRGGSAKQRKVIEEESQRKRKSSRCNCGAKMLINKNTIGFEEKWVVKYFYNNHNHELLDDKEVQFLPTYRNISIVDKDRILLLSKAGCPVSLIIRVLELEKGIDPGNLPFLEKDIRNFIQSQSSIGKENDASDVLKLCKSLKDRDDAFQYDFTLDENNKLEHIIWAFGDSIQAYEVFGDVVVFYTTYRINRYDMPLGLWVGVDNHGNSIFFGCVLLRNEKLSSFTWALKSFLYFVKGKCPQTILTDQDLALKEAISMEFPNTKHAFCIWHIVAKLSSWFSFPLGSRYNEFKSEFYRLYHLECANDFEREWNLMVSQFGLSMDRHIDLLYSHRQFWALAYLKEFFFAGMTTTGRSESINSYIKRFLDVKTSLIDFVNQVGVAVNIRNQAGEEARMRQKYHNHQIRTGFPLEEHVASIFTPYAFELLQQEIQLSTKYAAIEAGNDSYIVQHHTKVDGGRSSLVRCLEVESLKTKDRVEVATKELGNVIQIIKSMPEIQEKSTEMEHDVPNHSGCEVEVENPIISKTKGRPKGSRPKGGVEVAKKPRRCHYPNCGGTNHDSRNCPNKKNNIEILPSQSPNKYVLSIYID. 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01353 636 Pfam FAR1 DNA-binding domain 10 108 IPR004330 -
Seca8g01353 636 Pfam MULE transposase domain 230 323 IPR018289 -
Seca8g01353 636 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 499 IPR031052 GO:0006355
Seca8g01353 636 MobiDBLite consensus disorder prediction 581 595 - -
Seca8g01353 636 MobiDBLite consensus disorder prediction 572 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01353 Seca-Chr8 22296713 22299034 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g01353 FAR1 6.2e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01353 - - tpra:123894382 827.394