Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01346 ATGGCCAACCACGTCTCAAACATTTCTCATCTCTTTGTCATCCTAATTCTACTTGCAGCTGTCTCATTTTTTTTTATTGTAGTTGGGAACATAGGACTCGCAGAAGTGCATGAACAAAATGTATGTTCACAACCTTTGGGCGCATGTGGTCCAATTGGAGATTGTGATAAAAGGTGCAAAGCATCACACAATGGTGGTCAAGGGTCTTGTAATTTAGGCCTTTGTACATGCAATTACATGTGTGGTCCTTCTCCAAGCCCACCCACCAAATATTGCACTGCTGGGCTTGGATCTTGCGATGGTGGGTGCATGGATAATTGTTGCAATTCAAAATGTGCCAACAAATTCAATCATGGTGTTGGGTCTTGTAACAAGATTGGTAATAACTACCTTTGTAGTTGCCAATATATTTGCTCTTCTTAG 423 0.4113 MANHVSNISHLFVILILLAAVSFFFIVVGNIGLAEVHEQNVCSQPLGACGPIGDCDKRCKASHNGGQGSCNLGLCTCNYMCGPSPSPPTKYCTAGLGSCDGGCMDNCCNSKCANKFNHGVGSCNKIGNNYLCSCQYICSS. 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01346 140 PANTHER DEFENSIN-LIKE PROTEIN 183 1 138 IPR039641 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01346 Seca-Chr8 21825623 21826102 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01346 3 138 Plant Defensins Gene Families AT5G38330 33.333 8.07e-17 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01346 - - gsj:114386687 156.762