Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01344 ATGGCCAACCACGTCTCAAACATTTCTCATCTCTTTGTCATCCTAATTCTACTTGCAGCTGTTGGGAACATAGGACTCGCAGAAGTGCATGAACAAAATGTATGTTCACAACCTTTGGGCGCATGTGGTCCAATTGGAGATTGTGATAAAAGGTGCAAAGCATCACACAATGGTGGTCAAGGGTCTTGCAATTTAGGCCCCTGTACATGCAATTACATGTGTGGTCCTTCTCCAAGCCCACCCACCAAATATTGCACTGCTGGGCTTGGACCTTGCGGTGGTGGGTGCATGGATAATTGTTGCAATTCAAAATGTGCCAACAAATTCAATCATGGTGCTGGGTTTTGTAACAAGATTGGTAATAACTACCTTTGTAGTTGCCAATATATTTGCTCTTCTTAG 402 0.4353 MANHVSNISHLFVILILLAAVGNIGLAEVHEQNVCSQPLGACGPIGDCDKRCKASHNGGQGSCNLGPCTCNYMCGPSPSPPTKYCTAGLGPCGGGCMDNCCNSKCANKFNHGAGFCNKIGNNYLCSCQYICSS. 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01344 133 PANTHER DEFENSIN-LIKE PROTEIN 183 1 131 IPR039641 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01344 Seca-Chr8 21808034 21808615 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01344 3 131 Plant Defensins Gene Families AT5G38330 38.060 2.28e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01344 - - gsj:114386687 156.762