Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01343 ATGGCCAATCACCTCTCAAACATTTCTCATCTCTTTGTCATCCTAATTCTACTTGCAGCTGTTGGGAACATAGGACTCGCAGAAGTGCATGAACAAAATGTATGTTCACAACCTTTAGGTGCATGTGGTCCAATTGGAGATTGTGATAAAAGGTGCAAAGCATCACACAATGGTGGTCAAGGATCTTGCAATTTAGGCCTCTGTACATGTGATTACATTTGTGGCCCTACTCCAACTCCAAGCCCACCCACCAAATATTGCACTGCTGGACTTGGACTTTGCGGTGGTGGGTGCATGAATGATTGTTGCAATGCAAAATGTGCCAAGAAATTCAATCATGGTACTGGGTCATGTGACAAGATTGCTTCTAACTACCTTTGTAGTTGCCAATATATTTGCTCTTCTTAG 408 0.4265 MANHLSNISHLFVILILLAAVGNIGLAEVHEQNVCSQPLGACGPIGDCDKRCKASHNGGQGSCNLGLCTCDYICGPTPTPSPPTKYCTAGLGLCGGGCMNDCCNAKCAKKFNHGTGSCDKIASNYLCSCQYICSS. 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01343 135 PANTHER DEFENSIN-LIKE PROTEIN 183 1 133 IPR039641 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01343 Seca-Chr8 21802840 21803327 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01343 3 133 Plant Defensins Gene Families AT5G38330 36.029 2.87e-17 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01343 - - gsj:114386687 150.599