Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01276 ATGCTATGGGAAAAGGTCCTCATTCAGAACAATGAACAACTGGAGTTGGTTAGGGAGGAGATCCGTGTTTCATCATTGTTCAATCACTCCAATATGCTCCCACTTCTTGATCATGCAATCATTTCTGTTAAGCCTACCCAAGAAACATCTTGGAACCATGAAGCATACTTGTTATTTCCAGTTCTTTTGGATGGAACATTGCTTGACAATGCCAAAACAATGAAAGCCAAGAAGGAATTCTATTCTACCTCAGATGTTCTTCAAATATTTTGGCAGCTTTGTGCAGGACTAAAGCACATGCACAGTTTAGATCCTCCATATGCACATAATGATGTCAAACCTAGTACTGTTCTCATAACACATAGGAAAGGACAGCTGCCTCTTGCCATACTGATGGACTTTGGCAGTGCTCATCCTGCCAGGAGACAAATTAGCTCCAGATCAGATGCACTCCAGTTGCAGGAATGGGCATCTGAACATTGCTCTGCTCCTTTCTGA 498 0.4217 MLWEKVLIQNNEQLELVREEIRVSSLFNHSNMLPLLDHAIISVKPTQETSWNHEAYLLFPVLLDGTLLDNAKTMKAKKEFYSTSDVLQIFWQLCAGLKHMHSLDPPYAHNDVKPSTVLITHRKGQLPLAILMDFGSAHPARRQISSRSDALQLQEWASEHCSAPF. 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01276 165 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 5 165 - -
Seca8g01276 165 Pfam Protein kinase domain 10 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g01276 165 SUPERFAMILY Protein kinase-like (PK-like) 9 142 IPR011009 -
Seca8g01276 165 Gene3D Transferase(Phosphotransferase) domain 1 3 164 - -
Seca8g01276 165 ProSiteProfiles Protein kinase domain profile. 1 165 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01276 Seca-Chr8 19910161 19917363 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Seca8g01276 Pkinase 6.9e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01276 K08856 - gmx:100803659 298.516