Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01269 ATGGATAGTCACTCACTCTCCAGTGGCACCGTTGATGAACACTTGCTCTCCACCTACCTTAATATGGATAAAATAAATCCATCCTCTGGTGCCCTTGCATCTGCTGCAGATAACTTTTCTATTACTATTGGTACTACCAATATCAATGAAAGGCTTGACGTTGGGTCCCGAGATAGCCAGTTTGTGAATGGTTCAACATCCATAATCAAACCGGACATGTTGGTCTCTGCTTTTGAAAATGGCTCTTCTATTAACTCAAAACAAACAATGTCTACTTTTTCTATTGGTACTTGGATCGATGATGATCTTGGTACCATGGATGGTCACTCACTCTATGATGATACCACTAACAAGGATGTGCTCTCCACTTACCTCAATATAGATAAACTAAACCCATCCTCTGGTGCTCCTGCATCTACTGCGGACAACATTGCTATTGCTAGTGGTACTACCAATATTAATGAAAGGCTTGACGTTGGGTCCCAACATAGCCAATTTATGAATGGTTCAACATCCATCATCAAACCTGACATGTTGGTCTCTGCGTTTGAAAATGGATCTACCATTAACTCAAGAAAAGCAAAGTCTGCTACTGAGCTTGCGAAGCTTGCCTTGGTTGACCCCAAGCGTGCTAAAAGGATTTTCGCAAATAGACAGTCTGCTATAAAATCAAAGGAAAAGAAGGCGCATTACATTTCGGAGCTTGAAAAGAAGGTGCAAACATTGGAAACTGAAAAGACATCCTTATCTACACAGTTAACTATCTCGCAAAGGGATACTCAAAGTAAGGATGATGAGAATAATGAGTTAAGGTTGGGGTTGCAAACTCTGATACAAACAACTTCAATTATATGA 855 0.4035 MDSHSLSSGTVDEHLLSTYLNMDKINPSSGALASAADNFSITIGTTNINERLDVGSRDSQFVNGSTSIIKPDMLVSAFENGSSINSKQTMSTFSIGTWIDDDLGTMDGHSLYDDTTNKDVLSTYLNIDKLNPSSGAPASTADNIAIASGTTNINERLDVGSQHSQFMNGSTSIIKPDMLVSAFENGSTINSRKAKSATELAKLALVDPKRAKRIFANRQSAIKSKEKKAHYISELEKKVQTLETEKTSLSTQLTISQRDTQSKDDENNELRLGLQTLIQTTSII. 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01269 284 Gene3D - 208 265 - -
Seca8g01269 284 Coils Coil 225 252 - -
Seca8g01269 284 Pfam bZIP transcription factor 209 264 IPR004827 GO:0003700|GO:0006355
Seca8g01269 284 MobiDBLite consensus disorder prediction 246 267 - -
Seca8g01269 284 SUPERFAMILY Leucine zipper domain 209 259 IPR046347 GO:0003700|GO:0006355
Seca8g01269 284 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 13 281 - -
Seca8g01269 284 SMART brlzneu 205 269 IPR004827 GO:0003700|GO:0006355
Seca8g01269 284 CDD bZIP_plant_RF2 210 261 IPR044759 GO:0003700|GO:0006355
Seca8g01269 284 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 207 270 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01269 Seca-Chr8 19738404 19739692 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01269 99 283 bZIP Transcription Factor Family AT1G06070 49.751 3.89e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca8g01269 bZIP_1 1.5e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01269 - - gmx:100786738 177.178