Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01261 ATGCTCCCTGGTATTTCTGACCGTATGAGCAAGGAGATCACTGCCCTGACTCCTTGCAGCATGATCATTAAGGTTGTGGCTCCACCAGAGAAAAAGTATAGTGTCTGGATTGGAGGATCAATCCTTGCATCCCTCGGCACCTTCCGGCAGATGTGGATATCTGAGGGTGAATATGATGAGTCTAGCCCATCCATTGTCCACAGAAACTGCTTCTAA 216 0.4815 MLPGISDRMSKEITALTPCSMIIKVVAPPEKKYSVWIGGSILASLGTFRQMWISEGEYDESSPSIVHRNCF. 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01261 71 Gene3D - 31 71 - -
Seca8g01261 71 SUPERFAMILY Actin-like ATPase domain 1 71 IPR043129 -
Seca8g01261 71 Gene3D - 1 30 - -
Seca8g01261 71 PANTHER ACTIN 1 64 IPR004000 -
Seca8g01261 71 Pfam Actin 1 71 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01261 Seca-Chr8 19545500 19546283 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01261 1 71 Cytoskeleton Gene Families AT5G09810 83.099 9.62e-38 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01261 K10355 - aof:109829917 126.716