Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01249 ATGGAAGATTTAATGGGTGATAAAGGCAATATGAATGTTGAGAACAATGCAACAGAGCTAATGGTGTTGTGGTTAATTAAGGAAGGAGAGGGAATTTCAAGACCGAATGGAGGGAATGGTGTCGATGTTGATAATGAAGATGGTCGTGTTGAGTGTGAAGGTGAACACATGGATGAACAATCTGATGAAGAAGATTACAGCGGTGAGTATAAAATAGACAATGCTGCATATATAAAGCGGGTTGACTTCTTGGGTTTATCTACTGAAGAGTTTAAATCGTACCACTTTGTCAGTCGTCTTGTGGCATTTGAATTCCATAACACGTATGCACGAAAAAGGGGATTTGCTGCTCGAAGATCGAATGTTCTGAAAAATAAAAGACGAGAAATTACCCAACAAGAATTTGTTTGTTTCAAGGAGGGATTTCGTGACAAGAAACACTTAGAGAGGGAAGGTCGAAAGTGA 465 0.3914 MEDLMGDKGNMNVENNATELMVLWLIKEGEGISRPNGGNGVDVDNEDGRVECEGEHMDEQSDEEDYSGEYKIDNAAYIKRVDFLGLSTEEFKSYHFVSRLVAFEFHNTYARKRGFAARRSNVLKNKRREITQQEFVCFKEGFRDKKHLEREGRK. 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01249 154 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 42 149 - -
Seca8g01249 154 Pfam FAR1 DNA-binding domain 104 151 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01249 Seca-Chr8 19264744 19265990 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g01249 FAR1 1.6e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01249 - K17604 lja:Lj1g3v3556900.1 80.8777