LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca8g01232	ATGGATTGGATGCCTAGTGTTGGCAAGGAATTTGATGATCCTGAAGAAGCTTGGCTGTTTTGGGTAGAATACGGTTCAAGAATGGGTTTTGGGGTTAGAAAAAACTACTTCAACAAAAGGAAGGAAGATGGCTCCATTACATCTTGTAGATTCGTTTGTTGTAAGGAGGGGAAGAAGAACAATAAGTCATCTTTGGTTAAAAAGCCCAGGGCTGATACAAGAACTGAGTGCCAAGCAAGAATAGCACTTGCTGTAAAAAATGGGAAGTTTGTAATTCATGAGTTTGTAGAGAATCATAACCACCCTTTACAACTTGTAGAAACAACACATATGCTAGCATCACATTGTAAAATTTCAGAAGTTCAAGCATATGAGATTGAAATGGCAGAGGACTCGGGATTGATGCAAAAGGCTTCATTTCAGCTTATGAGCACACATGCAGGAGGTAGAGCTAATCTTGGATATACACGGTTGGATGTGAAGAACTATCTCAAAGCAAGAAGACAACGTAGCATGGTGTATGGGGAAGCCGGTTGTCTCTTACAGTATTTTCAACGACAACTTTTGGAGAATCCATCATTTTACCATGCATATCAAATGGATTGTGATGAACAAATCACAAACATATTTTGGGCCGATGCAAAAATGATCCTGGACTATGGATTCTTTGGTGATGTTGTCTCTTTGGATACAACATATTGCACCAACCGTGCTAATAGACCACTAGCTTTGTTTTCAGGCATCAATCCTTATAGGGGTACAGTCATTTTTGGGGCTGCACTATTATATGATGAGACGGCTGGTTCATTCAAATGGTTATTTGAAACATTCCTTGAAGCACATGGGAAGAAGAAGCCTCAAAGTTTGTTCACTGACCAAGATCAAGCAATGGCTAAAGCACTAGCTCAAGTGATTCCAGAGACTCGACATGGTTTATGCACATGGCATTTGATGCAGAATAGGATCAAACATCTTGGCAATTTGATGAAGAAAGGAAGCCATTTCTTGACTGATTTCAAAAAATGTGTATGA	1032	0.3953	MDWMPSVGKEFDDPEEAWLFWVEYGSRMGFGVRKNYFNKRKEDGSITSCRFVCCKEGKKNNKSSLVKKPRADTRTECQARIALAVKNGKFVIHEFVENHNHPLQLVETTHMLASHCKISEVQAYEIEMAEDSGLMQKASFQLMSTHAGGRANLGYTRLDVKNYLKARRQRSMVYGEAGCLLQYFQRQLLENPSFYHAYQMDCDEQITNIFWADAKMILDYGFFGDVVSLDTTYCTNRANRPLALFSGINPYRGTVIFGAALLYDETAGSFKWLFETFLEAHGKKKPQSLFTDQDQAMAKALAQVIPETRHGLCTWHLMQNRIKHLGNLMKKGSHFLTDFKKCV.	344

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca8g01232	343	PANTHER	OS01G0519700 PROTEIN	4	343	-	-
	Seca8g01232	343	Pfam	MULE transposase domain	226	320	IPR018289	-
	Seca8g01232	343	Pfam	FAR1 DNA-binding domain	20	104	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca8g01232	Seca-Chr8	19024019	19025050	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Seca8g01232		MULE	1.2e-25	CL0219

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca8g01232	-		-	mtr:112419311	560.066