Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01185 ATGCCAAGTTGGATTGAGGCATTTTTAGAAAATACTTTCTTTAACAAATGTCTTTCTCATCCAATTCGTAGGAATGAGTTAAATAAATATTGTATTAACTGCGATATGTCAGCTTGGCAATATTGTGTATCATCAGGTTCTCATCGCCATCACAAGATGCTTAAAATTTATAGACATGTTTACAAAGATGTTGTCTCCCTTTCTGCTATGGAAAAGTATGTTGACTGCTCGCATATCCAGCCCTACAAGTGCAACAAGCGACGAGTTATTTCTCTGAATCCTCTCCCCCACTGTGGTTCAATATTAAATAATGAGGCATCATGCAACATCTGCAATAGAAAGTTGACTGAACCTAATTTATATCGCTACTGCTCTATTTCTTGCAAGGTTAGTTCCTCCTTCCATTTCCATCCAGAGTCCCCCTCTCCTTCTCCTCCTCCTCCTGAGGAAAATCAGGAGGAAACTTCTGAACCCCCAAAGCGGAAAAAGAGTAGAAAGGGAACACCCCACAGAGCTCCTTTCTTCTAA 528 0.4015 MPSWIEAFLENTFFNKCLSHPIRRNELNKYCINCDMSAWQYCVSSGSHRHHKMLKIYRHVYKDVVSLSAMEKYVDCSHIQPYKCNKRRVISLNPLPHCGSILNNEASCNICNRKLTEPNLYRYCSISCKVSSSFHFHPESPSPSPPPPEENQEETSEPPKRKKSRKGTPHRAPFF. 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01185 175 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 174 - -
Seca8g01185 175 SUPERFAMILY B-box zinc-binding domain 15 60 - -
Seca8g01185 175 Pfam PLATZ transcription factor 58 130 IPR006734 -
Seca8g01185 175 MobiDBLite consensus disorder prediction 135 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01185 Seca-Chr8 18003521 18005040 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Seca8g01185 PLATZ 3.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01185 - - tcc:18601328 234.958