Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01159 ATGTCTCCTTTTGCAAGAAGTGTCCCCTTGCTTTGGTTGCTTATAATATTGCTTTCAGCCAGTGATATTGCTCTTGGAAAAACACATGTGCAGGTCGTAAATCATTTGACGGGCAATTTGGACTTAACCTTTCACTGCAAATCTAAGGATGACGATCTTGGAATCCAACTTCTCCATCCTAGTCAGTCGTGGGAATGGAGTTTTAACCCTGCCAAATTCTTTTGGACCACACAATTCTATTGTCTCTTTCAATGGCAAGATAAAGATGGAGTCCAAGAGAAATGGTTTGATATATACATAGAAAATAGGGATGATTGCATAATTTGTACTTGGTTTATAATCCAAGATAGACCATGTCGGTACGTTACAGAAAAGGAGTCTGAATGCATTGACTGGAATAACTAA 405 0.3852 MSPFARSVPLLWLLIILLSASDIALGKTHVQVVNHLTGNLDLTFHCKSKDDDLGIQLLHPSQSWEWSFNPAKFFWTTQFYCLFQWQDKDGVQEKWFDIYIENRDDCIICTWFIIQDRPCRYVTEKESECIDWNN. 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01159 134 Pfam Plant self-incompatibility protein S1 29 132 IPR010264 -
Seca8g01159 134 PANTHER - 26 121 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01159 Seca-Chr8 17210555 17210959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01159 27 134 Carbohydrate Esterase AT3G16970 36.207 2.71e-17 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01159 - - lja:Lj3g3v2995840.1 108.997