Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01095 ATGTTCTCGAATTTGCGCATCATTGCTCAGGCCATTTGGATAGATTTGCAAAACACCGAGGAAGAGGAAATGTCTATGTTCGAAGAAAATGAGACATCTATGGGTTTGGACGATATAACCTCTCAACAGGGTGACGATTATAACGGTAGTCGAGGTCCATGTGATGATGCTATTGGGTTTGACAAAGGTGAAGAATTCTTAAGTGAAGAAAGTGTGCAAGATGATTGTTTTGAAGAAGTTATTATGATAAATGATTTTAATGATATTAAGAAGATTGATATGAAAAATATCAGGGAAGATGATCTTCGTAAATATGATTTTGCCGATCTAGATGTGGCCCACAAATTCTACAGATGGTATGGTAGGTCGAATGGGTTCTCTGTTCGTAAAAGCAATGTAGTATCGTACAGTAAGGATGACATTTTGCAGCAAACATTTATTTGTTCTGCAAAAGGACATAGAAGGGCTAGGCGTTCCACAAGAAGTTCTAAAAAGAGACAATCGAAACCGCTAACGAGGTTTGATTGTAAAGCAATGTTTCGTGTTCACATCAACGTCAACTCAGGCCGATGGCAGTCAGGGGGCTACCAAAAGATTGGATTTCTGAAGAAAGATATTTATAATGAGATAGGCAGACAAAGACAACAACAAGCTTCTGATGCTAGTGGTGCTCTGGAGTATCTTCGATAG 690 0.3884 MFSNLRIIAQAIWIDLQNTEEEEMSMFEENETSMGLDDITSQQGDDYNGSRGPCDDAIGFDKGEEFLSEESVQDDCFEEVIMINDFNDIKKIDMKNIREDDLRKYDFADLDVAHKFYRWYGRSNGFSVRKSNVVSYSKDDILQQTFICSAKGHRRARRSTRSSKKRQSKPLTRFDCKAMFRVHINVNSGRWQSGGYQKIGFLKKDIYNEIGRQRQQQASDASGALEYLR. 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01095 229 Pfam FAR1 DNA-binding domain 115 192 IPR004330 -
Seca8g01095 229 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 29 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01095 Seca-Chr8 15753062 15754922 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g01095 FAR1 1.8e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01095 - - tpra:123886262 169.474