Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01062 ATGCGGCTCAAAGTCAATGGTCCTAGCAAGACTCAAGTCGGCTTCTCTCTAGCCAGAGTTGACAACTCTCGTGACCAGCTTCTTTCTCTTGATGCTACCACTGACTCCTTCAGTGATAGAGGGCAAAAGTTACAACTTGGAGGACAGAGGAATGATTCTGCCAATAAACGGAGAAAATTAGGAGGATCCAAGATCGAAAATGACAGATTGAAAGTTGAAGCTGAAGCAAGTTCAACAGCTGGTAACAAGTCAGCTGAACAAAACACTAAACCTTCTGAGCCACCTAAGCAAGACTATATTCATGTGAGAGCAAGAAGGGGCCAAGCTACAAGAAAACCGTATGTAAGACCCATGTTCAAAAGAAAATAG 369 0.4336 MRLKVNGPSKTQVGFSLARVDNSRDQLLSLDATTDSFSDRGQKLQLGGQRNDSANKRRKLGGSKIENDRLKVEAEASSTAGNKSAEQNTKPSEPPKQDYIHVRARRGQATRKPYVRPMFKRK. 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01062 122 MobiDBLite consensus disorder prediction 106 122 - -
Seca8g01062 122 MobiDBLite consensus disorder prediction 33 51 - -
Seca8g01062 122 MobiDBLite consensus disorder prediction 52 73 - -
Seca8g01062 122 MobiDBLite consensus disorder prediction 77 94 - -
Seca8g01062 122 MobiDBLite consensus disorder prediction 33 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01062 Seca-Chr8 15335146 15339977 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01062 47 110 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 53.731 2.11e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01062 - - pop:7474855 92.8189