Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01060 ATGGTGAAGGGACACCAAGGAGAGCACGTCAGACTCTATGTGAGGGGTACAATCCTTGGATACAAAAGATCCAAATCAAACCAGTACCCAAACACATCTCTGGTCCTAATCGAGGGAGTGAACACTACAGAAGAGGTGTCATGGTATGCTGGTAAGCAAATGGCATATATCTACAAGGACAAGGTGAAGAAGGAACCAAAATGA 204 0.4461 MVKGHQGEHVRLYVRGTILGYKRSKSNQYPNTSLVLIEGVNTTEEVSWYAGKQMAYIYKDKVKKEPK. 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01060 67 Gene3D translation elongation factor selb, chain A, domain 4 6 67 IPR038661 -
Seca8g01060 67 PANTHER 60S RIBOSOMAL PROTEIN L35A 2 66 IPR001780 GO:0003735|GO:0005840|GO:0006412
Seca8g01060 67 SUPERFAMILY Translation proteins 12 60 IPR009000 -
Seca8g01060 67 Pfam Ribosomal protein L35Ae 12 65 IPR001780 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01060 Seca-Chr8 15311685 15312584 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01060 1 65 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 86.154 1.20e-35 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01060 K02917 - csav:115697954 119.012