Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01045 ATGTGGAGAACTGAACGTTCGGTGCTTTCTGTGCAGGATGTAATGTCTAATAGGATTTTTGGTCTTTATTGGTGTTGTCGTGGGAATTGTGTTCAAACCATGGGTGATGCAATTGATTTGACTGGGGATGGAGGAGTCATCAAGACCATTGTGAGGAAAAGCAAATCAGATGCTGTGGGTCCAACAGAAGATTTTCCTCTTGTTGATGTACACTATGAAGGCACGCTTGCTGATACTGGTGAAGTATTTGACACTACACATGAAGATAACACAATCTTCTCTTTCGAGGTCGGAAAGGGTAGTGTCATCAAGGCTTGGGATATTGCAGTGAAAACCATGAAGGTTGGAGAAATTGCGAAAATAACGTGCAAGCCAGAATATGCATATGGTAGTGCAGGATCTCCGCCAGATATTCCCCCAGATGCAACACTTGTTTTCGAAGTCGAACTAGTTGCCTGTAGGCCACGGAAGGGCTCCAGTCTGGGAAGTGTTTCAGAGGAGAGGGCTAGGCTAGAAGAGCTGAAGAAGCAGAGAGAGATGGCTGCTGCTGCCAAAGAGGAGGAGAAGAAGAAGAGGGAAGAAGCAAAAGCAGCAGCTGCAGCTCGTGTGCAAGCCAAGTTAGAAGCCAAGAAAGGTCAAGGAAAGGGTAAAGGGAAAGCAAAGTAG 666 0.461 MWRTERSVLSVQDVMSNRIFGLYWCCRGNCVQTMGDAIDLTGDGGVIKTIVRKSKSDAVGPTEDFPLVDVHYEGTLADTGEVFDTTHEDNTIFSFEVGKGSVIKAWDIAVKTMKVGEIAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVACRPRKGSSLGSVSEERARLEELKKQREMAAAAKEEEKKKREEAKAAAAARVQAKLEAKKGQGKGKGKAK. 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01045 221 Gene3D - 31 153 IPR046357 GO:0003755
Seca8g01045 221 FunFam Peptidylprolyl isomerase 34 153 - -
Seca8g01045 221 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 65 154 IPR001179 GO:0003755
Seca8g01045 221 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 67 151 IPR001179 GO:0003755
Seca8g01045 221 SUPERFAMILY FKBP-like 41 151 - -
Seca8g01045 221 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 37 214 - -
Seca8g01045 221 MobiDBLite consensus disorder prediction 182 199 - -
Seca8g01045 221 Coils Coil 164 203 - -
Seca8g01045 221 MobiDBLite consensus disorder prediction 182 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01045 Seca-Chr8 14969869 14974028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01045 39 179 Calmodulin-binding Proteins AT5G48570 32.680 1.26e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01045 K01802 - gmx:100500018 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g01045 8 14969869 14974028 Seca8g01045 8 14969869 14974028 ECH