Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01032 ATGGCTCTTGTGAATGGACCAATTGACATGGTTAGGAACATCTGTGGAGAGAAAGATTCATGGAGATTGAAAGTGAGGGTTGTCCGACTCTGGAAAAGTTGCTCTAAAAACGATCCTAAGAAAGTTTTCTCTTTGGAGATGGTTTTGGTGGGTGTCGAGGGTGCAAGGATACAGACAAGTATCCGTAAACCAATGATCCGCAAATTTGCCGATGTTGTTGTTGAGGGAGAGGTTTACAAGATGATTCACTTTGCTGTTGTGAAGAACTTGGGTAACTTCCGTGCCACCAAGCATGAGTTCAAGCTAATTTTCAACAGTAGGACAACTGTCTTTCGTGCTGAAAGCCAACTCATTCCAGAGTTTGGTTTGTCATTGTCAACCTCTGAGGATATAAGGAAAACCAAGGGGGAATCTGAATATTTGTATGATGTTGTTGGTGTTCTGACTGGAGTATCTTCAGAGAAACATTATTTGAATGATTATAAAACATGCACCATGATGTTTTTGGAGTTGAGTGATCATACGTAA 528 0.4072 MALVNGPIDMVRNICGEKDSWRLKVRVVRLWKSCSKNDPKKVFSLEMVLVGVEGARIQTSIRKPMIRKFADVVVEGEVYKMIHFAVVKNLGNFRATKHEFKLIFNSRTTVFRAESQLIPEFGLSLSTSEDIRKTKGESEYLYDVVGVLTGVSSEKHYLNDYKTCTMMFLELSDHT. 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01032 175 SUPERFAMILY Nucleic acid-binding proteins 13 114 IPR012340 -
Seca8g01032 175 Pfam Domain of unknown function DUF223 46 115 IPR003871 -
Seca8g01032 175 Coils Coil 171 175 - -
Seca8g01032 175 CDD RPA1_DBD_A_like 22 110 - -
Seca8g01032 175 Gene3D - 7 114 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01032 Seca-Chr8 14539256 14543994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01032 21 152 Core DNA Replication Machinery Family AT2G06510 28.467 1.97e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01032 - - lja:Lj0g3v0341019.1 166.777