Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01031 ATGCCCAACCCCATTATGGCGAAGGCACTCACACTTCTCCATGTTCTCCTTCTTGCCTCAATCCCTGTAAACTCTACTCAGGAAGAGTGGTTTTTTGTTGGGTTCCATGGAGCCAGCAACATAAGCATAAACGGCGATGCAGTGATTGAGGACAATGGCATACTTACCCTTACAAACGACACTGAAAAAGTTGTTGGGCACGCGTTTTATTCAAACCCAATCCACTTCAAGAACAACTCCACTGACGGCAAAGTTTTCTCCTTTTCCACAGCTTTTGCTTTTGCAATAACCACCAAGCTTCCAAAACAAGGTGGCCATGGCTTAGCCTTCACCATTTCTCCCTCTAAAGAGCTTAAAGGTGCTTATCCAAGCCAATACTTGGGCCTTCTCAACCTACACGATGTGGGGAAATTCTCTAACCACTTGTTTGCAGTGGAGTTTGACACTGTTCAAGACTATGCATTTGATGACATCAATGGCAACCACGTTGGTATCAACCTGAACAACATGAAATCTAACAGATCTGTTACCGTTGCTGATGGATCAACCAAGCAACACCTCAATTTGCAGAGTGGCAAGGTGATTCAAGCATGGGTGGATTACAATTCCTCTAGCAACCAATTGGATGTTAGGCTTTCCACAACCTCTTCAAAACCCAGTTCCCCAATCTTGTCATACCAAGTTGATCTCTCACCAATTCTTAAAGACATTATGTATGTGGGGTTTTCTGCTTCAACAGGGGTGCTAGCGAGCTTGCACTATATCCTGGGTTGGAGCTTCAAGATGAATGGGGAAGCAAAATCTCTGAACTTGGAAACATTACCATCACTCCCTGGGTCTAAGAACATCAAAAAGGCCTTAATACTTGGAATCACTGTTTCTATTTCTATTCTAACCATAATCTTGGCTATTGGGTTAACAACTTACCTAATAAGAAAGATGAAGAAAGGTGATGATATTGAAGCTTGGGAGCATAATATTGGTCCCCACAGGTTTCCCTATGAGGAGCTGAAACAAGCAACAAAAGGTTTCAAGGAGAAAGAACTAATTGGGTTTGGTGGGTTTGGTCGAGTTTACAAAGGGATTCTACCAAACACCAACACCCAAGTCGCAGTGAAGCGAATCTCCCAGGACTCAAAACAAGGGATGCAACAATTCATGTCAGAGATTGCAACCATTGGTAGGCTCCGTCACAGGAACCTAGTTCAATTACTAGGTTGGTGCCGGAAACGCTATGATCTACTACTTGTGTACGTTTTCATGCCCAATGGAAGCTTGGACAAGTACCTATTCGACCAACCCAGAGCAATTTTAAGCTGGGAACAGAGGTTCAAGATCATAAAGGGCGTAGCTTTGGGTCTGGTTTACTTGCATGAGGAATGGGAACAAACGGTGATTCACAGGGACATAAAAGCAGGGAACGTTTTGTTGGATTCAGAGATGAATGGAAGGTTAGGTGACTTTGGTTTGGCGAAGCTTTACGAGCATGGGGCGAACCCAAACACCACGTGTGTTGTGGGAACATTGGGGTACTTAGCACCAGAGTTAACTCGAACGGGGAAACCAACTACTAGTTCTGATGTGTTTGCATTTGGTGCTCTGTTGCTTGAAGTGGCGTGTGGGAGAAGACCCGTTGAGCCTAAAGCGTTGCCTGAGGAACTCATATTGGTGGATTGGGTTCGGGATATGTGGCGGGTCGGTGCTGTTTTGGAGGTTATGGACCTCAAATTGGGTGGGGTGTTTGATAAGGAGCAGGCTTTGCTTGTTCTGAAATTGGGGTTGTTGTGTTCAAGTGACAACCCTACAGAACGTCCTAGTATGAGGCAGGTGGTGATGTACTTGGAAGGGGAGGCGGCGCCGCCCCCGGTGGGTGATGGTGGTGAAGTTGGGAACTTTGGCCAGTTGTCCAACGTCGTTGTATTTTGA 1926 0.4553 MPNPIMAKALTLLHVLLLASIPVNSTQEEWFFVGFHGASNISINGDAVIEDNGILTLTNDTEKVVGHAFYSNPIHFKNNSTDGKVFSFSTAFAFAITTKLPKQGGHGLAFTISPSKELKGAYPSQYLGLLNLHDVGKFSNHLFAVEFDTVQDYAFDDINGNHVGINLNNMKSNRSVTVADGSTKQHLNLQSGKVIQAWVDYNSSSNQLDVRLSTTSSKPSSPILSYQVDLSPILKDIMYVGFSASTGVLASLHYILGWSFKMNGEAKSLNLETLPSLPGSKNIKKALILGITVSISILTIILAIGLTTYLIRKMKKGDDIEAWEHNIGPHRFPYEELKQATKGFKEKELIGFGGFGRVYKGILPNTNTQVAVKRISQDSKQGMQQFMSEIATIGRLRHRNLVQLLGWCRKRYDLLLVYVFMPNGSLDKYLFDQPRAILSWEQRFKIIKGVALGLVYLHEEWEQTVIHRDIKAGNVLLDSEMNGRLGDFGLAKLYEHGANPNTTCVVGTLGYLAPELTRTGKPTTSSDVFAFGALLLEVACGRRPVEPKALPEELILVDWVRDMWRVGAVLEVMDLKLGGVFDKEQALLVLKLGLLCSSDNPTERPSMRQVVMYLEGEAAPPPVGDGGEVGNFGQLSNVVVF. 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01031 641 Gene3D Transferase(Phosphotransferase) domain 1 421 622 - -
Seca8g01031 641 SMART serkin_6 344 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g01031 641 ProSiteProfiles Protein kinase domain profile. 344 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g01031 641 FunFam L-type lectin-domain containing receptor kinase IX.1 329 420 - -
Seca8g01031 641 SUPERFAMILY Protein kinase-like (PK-like) 326 618 IPR011009 -
Seca8g01031 641 CDD STKc_IRAK 350 616 - -
Seca8g01031 641 Gene3D Phosphorylase Kinase; domain 1 329 420 - -
Seca8g01031 641 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 278 IPR013320 -
Seca8g01031 641 ProSitePatterns Protein kinases ATP-binding region signature. 350 373 IPR017441 GO:0005524
Seca8g01031 641 CDD lectin_legume_LecRK_Arcelin_ConA 32 264 IPR001220 GO:0030246
Seca8g01031 641 Gene3D - 24 275 - -
Seca8g01031 641 FunFam L-type lectin-domain containing receptor kinase S.4 26 268 - -
Seca8g01031 641 FunFam L-type lectin-domain containing receptor kinase S.4 421 624 - -
Seca8g01031 641 Pfam Legume lectin domain 30 274 IPR001220 GO:0030246
Seca8g01031 641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Seca8g01031 641 PANTHER - 23 620 - -
Seca8g01031 641 Pfam Protein kinase domain 344 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01031 Seca-Chr8 14529477 14532336 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01031 23 623 Receptor kinase-like Gene Family AT3G55550 59.672 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Seca8g01031 Pkinase 9.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01031 - - zju:107413402 850.506