Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01018 ATGGATGCTGGGATAGAAAATATGTCAGGTGAACATGTAGAACAACCAATTTCAAGGGATCATGTAGAAGAATTAATTTCAGAGGATCATGTACAACAAAGTATGCTAGAGGCAGAGGTTGGCAGGATAATAGATTTGTCTAATAATGACATAATGGGTTTGGAGTTTGGAAGTGAAGAAGATGCTTATAATTTCTATTTTTCATATGCCAGATGTCATGGCTTTGCTATGAGGAAAGATGATGTAATTCGGGATGTGAAAGGCAATGTTATTATGCGTCAGTATTTATGTATCAAAGTTGGGTTAAGGGACAAAAAGCACTTTTTGAGGGTAGATCGTAAAAAAGAACATAGGCCTTTAACCTGTGTTAACTGTGAAGCAAAGTTACGAGTTAGATATGCTTATAAGACTGGGAAATTCAAGGTGGTTTCATTTATTGAGTGTCACAACCATGAGTTAACTCCGGCAAAATTTGTTCCTTTAATTCCTTCATTTCGTGGCTTGTCTGAAGTGGGATGCATTACATTCTCATGGGGTTAG 540 0.3685 MDAGIENMSGEHVEQPISRDHVEELISEDHVQQSMLEAEVGRIIDLSNNDIMGLEFGSEEDAYNFYFSYARCHGFAMRKDDVIRDVKGNVIMRQYLCIKVGLRDKKHFLRVDRKKEHRPLTCVNCEAKLRVRYAYKTGKFKVVSFIECHNHELTPAKFVPLIPSFRGLSEVGCITFSWG. 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01018 179 Pfam FAR1 DNA-binding domain 64 154 IPR004330 -
Seca8g01018 179 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 12 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01018 Seca-Chr8 14237460 14237999 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g01018 FAR1 1.2e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01018 - - ccaj:109794460 167.933