Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00999 ATGAAGAAAGGAGAAATTGCATTGGTGATCATACAGCCTGAATATGCTTTTTGTCCATCTGGGTCATCTCAAGAATTGGCTATTGTCCCTCCCAATTCCACTGTGTACTATGAAGTTGAGTTGCTTGCCTTTGTAAAGGTTGAGATAAAACAGTTACCAAGTCCAGCCTATTGA 174 0.4023 MKKGEIALVIIQPEYAFCPSGSSQELAIVPPNSTVYYEVELLAFVKVEIKQLPSPAY. 58
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00999 57 Gene3D - 1 50 IPR046357 GO:0003755
Seca8g00999 57 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 1 45 IPR001179 GO:0003755
Seca8g00999 57 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 1 42 IPR001179 GO:0003755
Seca8g00999 57 SUPERFAMILY FKBP-like 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00999 Seca-Chr8 13891482 13893635 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00999 1 48 Calmodulin-binding Proteins AT5G48570 43.750 1.99e-06 40.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00999 K09571 - gmx:100810243 84.3445