Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00993 ATGAATAGTAGAACCTCTGCTCTTCTTTTGCTTCCCCTCCTTAGCTTTACTTCACTTCTTCTGATATGTCATTCAACTTCTCCAGATGACCTGAAGACTTACATTGTCTATACTGGCAACAGCATGCAAGATGAAGCTTCTTCATTGTCCTTTTACAAAAACATGTTACAACAAGTTGCAGACAGCAATCCAGCACCTAAGCCTGTACTGCACCATTACAAACGTAGTTTCAATGGCTTTGTTGTGAAGCTAACAGAGGAAGAAGCTGATACAATGGCTGGACTTGATGGAGTGGTGTCTGTCTTTCCTAATGAAAAGAAACAACTCCTTACAACAAAGTCTTGGGATTTTATTGGTTTTCCATACCAAGTGGCAAGAACAAATGCTGAAAGTGATGTCATCATTGGATTAATTGACTCTGGAGCCTGGCCAGAATCTGACAGTTTCAATGACAAAGGATTTGGTCCACCACCTAGAAAATGGAAGGGCACCTGCCAAACTTCCAATTTCACTTGCAACAATAAAATAATTGGTGCTAAGTATTACAGAACTGCCAGTGATGGACCCTTGAGTGAAACAGATATCAAATCTCCAAGAGACACAATTGGTCATGGAACTCATACAGCATCAACAGCAGCTGGGAATCCAGTTAGCATGGCAAGCATGTTAGGCCTTGCACAAGGAACAGCAAGAGGTGGGGCTACATCAGCACGAATTGCTGTGTATAAAGCATGTTGGGATGATGGATGTGATGAAGCAGACATTCTTGCCGCATTTGATGATGCAATTGCAGATGGGGTTGACATAATTTCAGTCTCACTTGGAGGATTCAGTGATGAAAACTATTTTAGAGATTCATTATCCATTGGGGCATTTCATGCTATGAGAAATGGAATACTGACAGTATATGCAGCAGGAAACTCAGGTCCAGCCATTGGATCCATAGACAATTTTTCACCTTGGTCAATTTCTGTAGCTGCTAGCACCTTAGACAGGAAGTTTGTTACTAAGGTCCAATTAGGAGACAACAGAACTTATGAGGGAATCTCTATAAATACATTTGACCTTAAGGGAGAATTTTATCCTATAATCTATGGTGGAGATGCACCAAATACTTCAGCTGGCTCTGATGAAACTTCATCTAGGATTTGCTATATGAATTCTTTGGATAAAAATTTGGTGAAGGGTAAAATTGTTCTCTGTGAGGGCGGAATGGGGATAGGAGCCTTAAAAGCTGGTGCTGTTGGTATCCTGACACAAGGACAAATTTCTAGAAATGATGCATACTCTTATCCCTTACCTGCATCTTTCCTTGACTTGAAGGATGGTGCTGATATATTTGACTACGTAAAGTCTGTAAGGACTCCCACTGGAACCATATTTAAGAGTATTGAGTTTAAAGATACTTTGGCCCCTGAAGTGGCCTCTTTCTCATCAAGGGGTCCGAACATTGTTACACCTGAAATTCTCAAGCCGGATCTGATTGCTCCTGGAGTGGACATTATAGCTAGTTGGTCTCCAATTTCCCCTGTTTCTGGATTTGATGGTGACAAAAGAAAATTAGAGTTCAATATTATCTCAGGAACATCAATGTCTTGCCCACATGTGTCTGGTGCAGCAGGGTACATCAAATCATTTCATCCTTCATGGTCTCCTGCTGCTATCCGTTCAGCTCTAATGACAACAGCTAAACAGTTTACTCCCATGAATAACCTTGATGCAGAATTTGGATATGGAGCAGGACTAATTGATCCTTCTAAGGCTGTGAATCCTGGTTTAGTATATGATGCTGATGAAAGTGATTATGTAAGGTTTTTATGTGGACAGGGCTATAGTTTAAAGAATTTACAACTCATCACAGGGGATAATAGCACCTGCTCTGAGACAACTTATGGAACAGCAAGGGATCTAAACTATCCTTCCTTTGCTCTTCAAGCCTCACTCTCTATGCCCAATGTGAGTGGTAGTTTCAAAAGGACTGTTACAAATGTTGGTTCAGCAAAGTCCACATATAAAGCTGTTGTGACAGCACCTCAAGGACTTAGAATCCAAGTGAATCCAAGCGTTTTGTCATTCACTTCTCTTGGCCAAAAGCAAACATTTGTTCTCAGTATTGATGGAGCAATAGATAGACCTATTGTGTCAGCTTCTTTGGTTTGGGATGATGGTAAATTCCAAGTGAGGAGCCCCATTGTTGTGTTTAATGTAGCAATACCATAA 2220 0.4081 MNSRTSALLLLPLLSFTSLLLICHSTSPDDLKTYIVYTGNSMQDEASSLSFYKNMLQQVADSNPAPKPVLHHYKRSFNGFVVKLTEEEADTMAGLDGVVSVFPNEKKQLLTTKSWDFIGFPYQVARTNAESDVIIGLIDSGAWPESDSFNDKGFGPPPRKWKGTCQTSNFTCNNKIIGAKYYRTASDGPLSETDIKSPRDTIGHGTHTASTAAGNPVSMASMLGLAQGTARGGATSARIAVYKACWDDGCDEADILAAFDDAIADGVDIISVSLGGFSDENYFRDSLSIGAFHAMRNGILTVYAAGNSGPAIGSIDNFSPWSISVAASTLDRKFVTKVQLGDNRTYEGISINTFDLKGEFYPIIYGGDAPNTSAGSDETSSRICYMNSLDKNLVKGKIVLCEGGMGIGALKAGAVGILTQGQISRNDAYSYPLPASFLDLKDGADIFDYVKSVRTPTGTIFKSIEFKDTLAPEVASFSSRGPNIVTPEILKPDLIAPGVDIIASWSPISPVSGFDGDKRKLEFNIISGTSMSCPHVSGAAGYIKSFHPSWSPAAIRSALMTTAKQFTPMNNLDAEFGYGAGLIDPSKAVNPGLVYDADESDYVRFLCGQGYSLKNLQLITGDNSTCSETTYGTARDLNYPSFALQASLSMPNVSGSFKRTVTNVGSAKSTYKAVVTAPQGLRIQVNPSVLSFTSLGQKQTFVLSIDGAIDRPIVSASLVWDDGKFQVRSPIVVFNVAIP. 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00993 739 FunFam Subtilisin-like protease SBT1.5 132 349 - -
Seca8g00993 739 SUPERFAMILY Subtilisin-like 109 593 IPR036852 GO:0004252|GO:0006508
Seca8g00993 739 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 109 IPR037045 -
Seca8g00993 739 CDD Peptidases_S8_3 107 563 IPR034197 -
Seca8g00993 739 ProSitePatterns Serine proteases, subtilase family, serine active site. 528 538 IPR023828 -
Seca8g00993 739 Pfam Fibronectin type-III domain 636 733 IPR041469 -
Seca8g00993 739 Gene3D - 331 467 - -
Seca8g00993 739 Pfam Subtilase family 131 579 IPR000209 GO:0006508|GO:0008236
Seca8g00993 739 PRINTS Subtilisin serine protease family (S8) signature 200 213 IPR015500 -
Seca8g00993 739 PRINTS Subtilisin serine protease family (S8) signature 527 543 IPR015500 -
Seca8g00993 739 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Seca8g00993 739 CDD PA_subtilisin_like 338 460 - -
Seca8g00993 739 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 733 IPR045051 -
Seca8g00993 739 ProSiteProfiles Serine proteases, subtilase domain profile. 114 589 - -
Seca8g00993 739 Gene3D Peptidase S8/S53 domain 132 602 IPR036852 GO:0004252|GO:0006508
Seca8g00993 739 Pfam Peptidase inhibitor I9 33 108 IPR010259 -
Seca8g00993 739 Gene3D - 606 736 - -
Seca8g00993 739 MobiDBLite consensus disorder prediction 190 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00993 Seca-Chr8 13820543 13824697 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00993 30 734 Subtilisin-like Serine Gene Family AT5G59100 47.091 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00993 - - gmx:100784447 1151.35