Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00991 ATGGTTCAAAATGTCCTCGGCAGCAAATTTGCCCCAGATGCTTTGCTTCATAGCTACAAGAAGAGTTTTAATGGATTTGTCGCGAGACTGACAAGTGAGGAAGCACTGAGAATGTCAGAATTGGATGGTGTGGTCTCTGTTTTCCCAAGTAAAAACCATAAGCTCCATACAACAAGGTCATGGGACTTCATAGGCTTCCCTCAAGATATTAGAAGAACCAGCATAGAGAGCGACATAATCATAGGAGTAATTGATACCGGAATATGGCCTGAGTCAGTTAGCTTTAATGACGAAGGATTTAGTCCACCACCACATAAATGGAAGGGCAATTGCCACAACCTTACTTGCAATAACAAACTAATTGGAGCAAAATATTTTCGCATAGATGGATTGTATGGAAAAGATGACATCATATCTCCAAGGGATTCGAATGGTCATGGGACTCACTGTGCCTCCACTGCTGCTGGAAACTCAGTTAAATCTGCAAGTTTATTTGGACTTGCTTCAGGGACAGCAAGAGGAGGAGTTCCATCAGCACGTATTGCTGTATACAAATCGTGTTGGTCAGGAGGTTGTGAAGAAGCTGACACCCTTGCAGCATTTGATGAAGCCATTGCAGATGGTGTTGACATCATTTCCCTTTCAGTGGGACCTCGAACGGTGCTACACAAAAACTATTTTGAAGACATATTTGCCATAGGAGCTTTCCATGCAATGAAGAAAGGCATATTAACATCGACATCTGCAGGTAATTTAGGTCCACAACTTTACTCAGACCCAAAAGTTGCACCATGGTTACTTTCTGTAGCAGCTAGCACTATAGACAGAAAGTTTTATACCAAGGTCCGGTTGGGCGATGGCACCATCTTTCAGGGAGTTTCAATAAATACATTTGATCTTAAAAATGTAAGTTATCCATTAATTTACGCTGGAGATGCACCCAACATCACTGGTGGATATAATAGTTCCATATCCAGGTCTTGCCTTGAAGGTTCTTTAGAACAAGATTTGGTAAAGGGAAAGATTGTTCTTTGCGATGTGTTTCGGGGTTCCTCATCAGTGGGACTCGTTTCTGGGGCAGCTGGTATTCTATTTCGTAGTTTTGCTCCAAAAGATGTGGCACGTACATTTGCACTGCCAGCGATTCATCTTAGCGAAAACGATGGGAAACTCATACATTCTTACATAAATTCAACAAGTAGTAATCCAACAGCTATAATATTTAAGAGTACTGAAGACAAAGATTCGTTTGCCCCATATATAGCTTCATTTTCATCTAGAGGTCCGAATGCTATCACTCCAGACATTCTCAAGCCTGATCTAGCCGCTCCTGGAGTTGACATTTTAGCTGCATGGTCTCCAATTGCTCCCATTTCAAGGGTTAAAGCTGATGATAGAGTAGCAAACTACAACATAATATCTGGAACTTCAATGGCATGTCCTCATGCTACTGCAGCCGCTGCTTACGTCAAATCATTTCATCCCAATTGGTCACCGGCAGCAATCAAATCTGCACTAATGACCACCGCTACCCCTATGAGTGCCACACTTAATCCTGAAGCTGAATTTGCTTATGGTGCGGGGCAAATTAACCCCATTAAGGCAGTGAATCCTGGATTAGTATATGATTCCGATGAAATCGATTATGTTAAGTTTCTATGTGGACAAGGTTATGATACAAAAAAGCTACAAACCATCACAGATGATAATAGCAGTTGTACGTCAACTAATAATGGAACCGCTTGGGACCTTAATCTCCCATCTTTTGCTCTTTCCACAAACCTGTCAAGATCTTTTAGTCGCATTTTCCACAGAACTGTTACAAATGTTGGATCTGCAACATCAAGGTACAAAGCTAGAATAAACGCACCTCCATCTTTGTTAAACATTAAAGTGGAGCCAGATGTTTTGTCTTTCTCATCTGTGGGTGAAAAGAAGTCATTTACTTTAAGGATTGAAGGGAGAATTAATGTGAATATAGTTTCTTCTTCTTTGGTTTGGGATGATGGCATTTTTCAAGTAAGGAGCCCTATTGTTGTTTATGCTAAATAA 2052 0.4094 MVQNVLGSKFAPDALLHSYKKSFNGFVARLTSEEALRMSELDGVVSVFPSKNHKLHTTRSWDFIGFPQDIRRTSIESDIIIGVIDTGIWPESVSFNDEGFSPPPHKWKGNCHNLTCNNKLIGAKYFRIDGLYGKDDIISPRDSNGHGTHCASTAAGNSVKSASLFGLASGTARGGVPSARIAVYKSCWSGGCEEADTLAAFDEAIADGVDIISLSVGPRTVLHKNYFEDIFAIGAFHAMKKGILTSTSAGNLGPQLYSDPKVAPWLLSVAASTIDRKFYTKVRLGDGTIFQGVSINTFDLKNVSYPLIYAGDAPNITGGYNSSISRSCLEGSLEQDLVKGKIVLCDVFRGSSSVGLVSGAAGILFRSFAPKDVARTFALPAIHLSENDGKLIHSYINSTSSNPTAIIFKSTEDKDSFAPYIASFSSRGPNAITPDILKPDLAAPGVDILAAWSPIAPISRVKADDRVANYNIISGTSMACPHATAAAAYVKSFHPNWSPAAIKSALMTTATPMSATLNPEAEFAYGAGQINPIKAVNPGLVYDSDEIDYVKFLCGQGYDTKKLQTITDDNSSCTSTNNGTAWDLNLPSFALSTNLSRSFSRIFHRTVTNVGSATSRYKARINAPPSLLNIKVEPDVLSFSSVGEKKSFTLRIEGRINVNIVSSSLVWDDGIFQVRSPIVVYAK. 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00991 683 Gene3D Peptidase S8/S53 domain 78 549 IPR036852 GO:0004252|GO:0006508
Seca8g00991 683 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 15 680 IPR045051 -
Seca8g00991 683 FunFam Subtilisin-like protease SBT1.5 78 286 - -
Seca8g00991 683 SUPERFAMILY Subtilisin-like 55 540 IPR036852 GO:0004252|GO:0006508
Seca8g00991 683 ProSitePatterns Serine proteases, subtilase family, serine active site. 475 485 IPR023828 -
Seca8g00991 683 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 56 IPR037045 -
Seca8g00991 683 PRINTS Subtilisin serine protease family (S8) signature 76 95 IPR015500 -
Seca8g00991 683 PRINTS Subtilisin serine protease family (S8) signature 142 155 IPR015500 -
Seca8g00991 683 PRINTS Subtilisin serine protease family (S8) signature 474 490 IPR015500 -
Seca8g00991 683 Gene3D - 553 682 - -
Seca8g00991 683 Pfam Fibronectin type-III domain 583 680 IPR041469 -
Seca8g00991 683 Gene3D - 275 414 - -
Seca8g00991 683 CDD Peptidases_S8_3 53 511 IPR034197 -
Seca8g00991 683 CDD PA_subtilisin_like 282 407 - -
Seca8g00991 683 ProSitePatterns Serine proteases, subtilase family, histidine active site. 146 156 IPR022398 -
Seca8g00991 683 Pfam Peptidase inhibitor I9 9 56 IPR010259 -
Seca8g00991 683 Pfam Subtilase family 77 528 IPR000209 GO:0006508|GO:0008236
Seca8g00991 683 ProSiteProfiles Serine proteases, subtilase domain profile. 60 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00991 Seca-Chr8 13761448 13768421 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00991 1 682 Subtilisin-like Serine Gene Family AT3G46850 49.427 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00991 - - gmx:100801111 1115.14