Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00987 ATGCTCCACAGCTTTAAGAGAAGTATTAATGGCTTTGTTGTGAAGCTCGCAGATGAGGAAGTGGAAAAAATTGCAGCATTGGAAGGTGTAGTTTCTGTTTTCTTAGGCTTTCCTCAACAAGCAACTAGAAGTACTAAGGAAAGTGACATAATTATAGGAGTGCTTGATACTGGAATCTGGCCAGACTCTAGTAGCTTTGATGACTCAGGTTTTGGTCCTCCACCTACCAAATGGAAAGGAACCTGTCATAATTTCACATGCAACAAAAAAATCATTGGAGCAAAATATTATCGAGGTGACAAATTTTTTAAGGAAGATGATATTCAATCTCCAATAGACTCTGTTGGCCATGGAACACACACAGCATCAACAATTGCAGGAGGATTAGTTAGCTCAGCAAGCCTAAATGGCCTTGCATTTGATGATGCAATTGCAGATGGTGTTGACATAATTTCTCTTTCAGTAGGAGGCCAAACTGCTAATGACTATTTTAATGATTCAATTGCTATTGGAGCTTTTCATGCTATGAGAAATGGAATATTAACATCAATGTCTGCTGCGAACAATGGTCCAGGCATTGCAACAATCTCAAAATTTTTCACCTTGGGAGTTTCAGTAAATACATACCAAAGTAGTAACCTGTATCCTATAATTTATGGTGGAGATGCACCAAACATCTTAGAGGGCTTTAATAGCACCATATCCAGGCGTTGCTTGGAAAACTCATTGGATCCAAATTTGGTGAAAAATAAAATTGTTCTTTGTGATGACTTTGTTCATGCTGGTAAGGTTGGATTTGCATCTGGTGCAGCTGGAATTTTTTCTTCAAGAGGTCCAAATCCAATTACACTTGACATTCTCAAACCTGACATTGCAGCTCCAGGGGTTGAAATTCTAGCTGCATGGCCTCCAAATGCTCCTCCATCTGGTGTTAAAGGAGACAAGAGACAAGTACAGTATAATATCATCTCAGGAACATCAATGGCATGTCCACATGCTACAGGGGTAGCTGCCTACATCAAATCCTTCCATCCTACTTGGTCTCCTGCAGCAATTAAGTCAGCAATTATGACAACAGAAGCAGAATTTGCATATGGAGCAGGCCATATAGATCCTTTTATGGCATTGAATCCTGGTTTAGTATATGATGCTAGTGAGTCTGACTATGTGAATTTCTTATGCGGGCAAGGTTATGACACAGTCATGTTACAGAGAGTTACTGGTGATACTAGTACCTGTGTAGGAGTCACTGATGGGAATGTTTGGGATTTGAACTATCCTTCTTTTGCTGTTTCCACAACTTCTGGAGTATTTTTCAGCCGTGTTTTCACTAGGACTGTCACAATCACAAATGCTGGTTCCCCAACCTCCATATATAATGCTATTGTGACTGCACCAAAGGGGCTTGAGATCAAAATGAATCCTTCAAGTATGTCTTTCAGTTCTGTTGGGCAGAACCAGAACTTTCAGCTCAGAGTTCAGGGAAGCCTAGGCACCAATTTATTAGCTTCTGCTTCTTTGATATGGGATGATGGGAAACACAAAGTGAGGAGTCCCATTACTGTATTTCTGGTTGAATCAAAATAG 1587 0.4014 MLHSFKRSINGFVVKLADEEVEKIAALEGVVSVFLGFPQQATRSTKESDIIIGVLDTGIWPDSSSFDDSGFGPPPTKWKGTCHNFTCNKKIIGAKYYRGDKFFKEDDIQSPIDSVGHGTHTASTIAGGLVSSASLNGLAFDDAIADGVDIISLSVGGQTANDYFNDSIAIGAFHAMRNGILTSMSAANNGPGIATISKFFTLGVSVNTYQSSNLYPIIYGGDAPNILEGFNSTISRRCLENSLDPNLVKNKIVLCDDFVHAGKVGFASGAAGIFSSRGPNPITLDILKPDIAAPGVEILAAWPPNAPPSGVKGDKRQVQYNIISGTSMACPHATGVAAYIKSFHPTWSPAAIKSAIMTTEAEFAYGAGHIDPFMALNPGLVYDASESDYVNFLCGQGYDTVMLQRVTGDTSTCVGVTDGNVWDLNYPSFAVSTTSGVFFSRVFTRTVTITNAGSPTSIYNAIVTAPKGLEIKMNPSSMSFSSVGQNQNFQLRVQGSLGTNLLASASLIWDDGKHKVRSPITVFLVESK. 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00987 528 Gene3D - 393 524 - -
Seca8g00987 528 ProSiteProfiles Serine proteases, subtilase domain profile. 27 388 - -
Seca8g00987 528 Pfam Peptidase inhibitor I9 1 35 IPR010259 -
Seca8g00987 528 SUPERFAMILY Subtilisin-like 41 377 IPR036852 GO:0004252|GO:0006508
Seca8g00987 528 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 40 IPR037045 -
Seca8g00987 528 Gene3D Peptidase S8/S53 domain 140 199 IPR036852 GO:0004252|GO:0006508
Seca8g00987 528 Gene3D Peptidase S8/S53 domain 49 139 IPR036852 GO:0004252|GO:0006508
Seca8g00987 528 Gene3D Peptidase S8/S53 domain 273 389 IPR036852 GO:0004252|GO:0006508
Seca8g00987 528 Pfam Fibronectin type-III domain 423 522 IPR041469 -
Seca8g00987 528 ProSitePatterns Serine proteases, subtilase family, serine active site. 325 335 IPR023828 -
Seca8g00987 528 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 139 264 IPR045051 -
Seca8g00987 528 Pfam Subtilase family 137 368 IPR000209 GO:0006508|GO:0008236
Seca8g00987 528 Pfam Subtilase family 48 141 IPR000209 GO:0006508|GO:0008236
Seca8g00987 528 PRINTS Subtilisin serine protease family (S8) signature 113 126 IPR015500 -
Seca8g00987 528 PRINTS Subtilisin serine protease family (S8) signature 324 340 IPR015500 -
Seca8g00987 528 PRINTS Subtilisin serine protease family (S8) signature 47 66 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00987 Seca-Chr8 13706962 13709719 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00987 1 523 Subtilisin-like Serine Gene Family AT5G59100 38.552 1.40e-135 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00987 - - csv:101215626 577.785