Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00945 ATGGCAGGGGTGTATGATTTGATCAAGGAAGTGTATCCAGGGCGTCAGAACTGGAGGTTGAAGGCAAGAATCATCAGGCTGTGGGAGATGTGTCCAATGGAGCAGCCAGGCAATCCCTTTGCAATTAAAATGGTCATGATTGATGCCAGGCATGCTGTCATGAGTTCAAGTTGCTGTTTCATGGGAAGACTAGAGTGGCTGAGTGCGAAGGGGTTCCAATCCCCATGTATGGCTTTGTCACTGATGACAACCGAGGACATTAAGAACACCGGAGGGCGGTCTGACTATCTCATAGATTTCATGGGGATATTGTTTGCTGTATCATCTGAGAAGACGTCTGATAGGAGTGGGCGAACAACCAGGTTTATAGTGATGGAGTTGAACGATGATAAGGGGATGATACGCTGCACTATGTTTGGGGAATATGTGGATGCAATCAATGTGCATCTTGCTGAGGCAGGGGATGAGTTGCCTGTTGTTGTGGTGCAGCTTGGTCGTGTCAAGACCTACAAGGGTGATATAACAATCCAAAATGTGGTTAACACCACCAAGATAATTTTGAACCCTAACATCCCAGAGGTGCAGACCTTCAAGAATAGGCTCACACTTAATGGGTTTGAGATTGAAGCTTCCATTGGGGAGATAGGTGAAGGTTACAAGGAATTGCCCTTGAAGGATGATTTCTTGGGGTTTTTTTTTTCCAAGGAAGACAATCCTGAAGCTGCATGTTACAGAAGAGGAGGGCAACTTCATAACTTCATTGTGTTGGGAACCATTGCTGCTGTTCTGAAGGATGATCAGTGGTGGTATTATGCATGTCGTTGCATGAAGGCCGTAAACGAGGATGGTGGGGAGTATTTCTGTCCAGCTTGCTGCATCAATGTTGATCATGTGACACCAAGGTAA 906 0.4592 MAGVYDLIKEVYPGRQNWRLKARIIRLWEMCPMEQPGNPFAIKMVMIDARHAVMSSSCCFMGRLEWLSAKGFQSPCMALSLMTTEDIKNTGGRSDYLIDFMGILFAVSSEKTSDRSGRTTRFIVMELNDDKGMIRCTMFGEYVDAINVHLAEAGDELPVVVVQLGRVKTYKGDITIQNVVNTTKIILNPNIPEVQTFKNRLTLNGFEIEASIGEIGEGYKELPLKDDFLGFFFSKEDNPEAACYRRGGQLHNFIVLGTIAAVLKDDQWWYYACRCMKAVNEDGGEYFCPACCINVDHVTPR. 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00945 301 PANTHER OS03G0429900 PROTEIN 7 200 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Seca8g00945 301 SUPERFAMILY Nucleic acid-binding proteins 251 301 IPR012340 -
Seca8g00945 301 Gene3D - 240 301 IPR012340 -
Seca8g00945 301 SUPERFAMILY Nucleic acid-binding proteins 80 207 IPR012340 -
Seca8g00945 301 CDD RPA1_DBD_B_like 99 201 - -
Seca8g00945 301 Gene3D - 75 210 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00945 Seca-Chr8 12953518 12955233 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00945 75 291 Core DNA Replication Machinery Family AT2G06510 21.757 2.87e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00945 - - lja:Lj6g3v0884310.1 199.134