Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00940 ATGTCCGACGCTCTGATCAATGGACTGGCTGGAGCGGGAGGAGGGATCATTGCCCAACTCATTACCTATCCTCTTCAAACTGTAAACACTCGTCAACAAACCGATCGTGATCCGAAGAAGGACAACAGGAATTTAGGAACTTTCCAACAAATGTGCCAGGTTGTGAATCAAGAGGGGTGGGAGCGGTTGTATGGAGGCTTGATGCCATCGTTAGTAGGTACCGCTGCGTCTCAGGGTGTTTATTATTATTTCTATCAAATATTCAGGAACAGAGCTGAAACAGCTGCATTAGAAAAGAAAAGGCTAGGCATCGGTGATGGATCAGTTGGGATGTTCTCCTCACTTATTGTTGCTGCTTTATCTGGGTGTGTTAATGTGCTCTTGACAAATCCCATATGGGTAGTTGTTACCCGCATGCAGACACATAGAAAAGACTCAAAAGAGTCAAGCAGAACTCTCCCTGACCAGGGGTTGTCAAATGCCCTTGGACAAACAATGCTTTCTACTGTTGAGCCTCTTGCTTATGGAACTAGCCATGTGATTCAAGAAGTTTATGATGAAGCTGGAGTTTGGGGTTTTTGGAAAGGTGTATTACCAACATTGATTATGGTGAGCAATCCTTCCATACAGTTCATGCTGTATGAAACCATGTTGGCAAAGTTAAAAAAAAGGCGTGCTCGGAGTAAGAAGGATAGCACTGGGGTAACTGCTTTGGAGATATTTCTTCTTGGAGCTTTGGCTAAGCTTGGAGCTACTGTTGTAACTTATCCTCTTCTAGTTGTGAAGGCAAGGCTTCAAGCTAGGCAGGTTAAAAATGCAGACAAGAGACACCATTATAAAGGTTTAAGTTGTGATGATCTTTTCTTATTCATAAGCCAATTAAAATGCATTTTATCTGTGCTTCTGATCTCGGTTGCCAAAAGTGAGGTTATGAACCCTGTAACATATACTTACTAG 957 0.4263 MSDALINGLAGAGGGIIAQLITYPLQTVNTRQQTDRDPKKDNRNLGTFQQMCQVVNQEGWERLYGGLMPSLVGTAASQGVYYYFYQIFRNRAETAALEKKRLGIGDGSVGMFSSLIVAALSGCVNVLLTNPIWVVVTRMQTHRKDSKESSRTLPDQGLSNALGQTMLSTVEPLAYGTSHVIQEVYDEAGVWGFWKGVLPTLIMVSNPSIQFMLYETMLAKLKKRRARSKKDSTGVTALEIFLLGALAKLGATVVTYPLLVVKARLQARQVKNADKRHHYKGLSCDDLFLFISQLKCILSVLLISVAKSEVMNPVTYTY. 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00940 318 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 281 IPR044712 GO:0006862|GO:0055085
Seca8g00940 318 Gene3D Mitochondrial carrier domain 9 300 IPR023395 -
Seca8g00940 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 220 IPR018108 -
Seca8g00940 318 SUPERFAMILY Mitochondrial carrier 3 281 IPR023395 -
Seca8g00940 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 91 IPR018108 -
Seca8g00940 318 Pfam Mitochondrial carrier protein 237 290 IPR018108 -
Seca8g00940 318 Pfam Mitochondrial carrier protein 7 90 IPR018108 -
Seca8g00940 318 Pfam Mitochondrial carrier protein 109 223 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00940 Seca-Chr8 12908350 12918442 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00940 24 277 Chloroplast and Mitochondria Gene Families AT1G25380 27.586 1.66e-19 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00940 K13354 - gmx:100775784 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00940 8 12908350 12918442 Seca8g00940 8 12908350 12918442 ECH