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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Seca8g00938
ATGCCTTCTTCTTCACCCATCTTGCTCTCAAAATGCACTGTCTTCCCAGACCAAAAGTCCACTCTCGGTACTCTCAAACTCTCGGTTTCAGACCTTCCTATGCTTTCTTGCCACTACATCCAAAAGGGTTGCCTCTTCACACAACCTTCCATCCCATTCCACACTCTCATTCCGCTCCTTAAATCTGCACTCTCTCACACTCTCTCTCTCTTTCCCCCTCTCGCCGGCCGCCTCACCACCGATTCCGACGGTTACGTCTACCTCACCTGCAACGACGCCGGCGTGGATTTCCTCCACGCCACTGCCACTGGACTCTACATCCACGACCTCCTGTCCCCTACCGATGTCCATGAGTCCTTCAAGGAATTCTTCACCTTCAACAGGAAAGTCAGTTACACCGGCCATTCCTCGCCGATTTTGGCCGTTCAGGTCACCGAACTCGCCGATGGCGTCTTCATTGGCTGCGCCGTCAACCACGCCATCACTGACGGAACCTCCTTCTGGAATTTCTTCAACACATTCGCGCAAGTCTGTAGAGGAGCCAGCCAGTGCCTCCGAAACGTGCCGGACTTTCGTCGCGAGTCTGTTCTTATCTCGAACGCCGTTCTCCGGTTGCCGGAGGGAGGTCCTGTGGTGACGTTCAACGCCGATGCGCCGCTGCGCGAGAGGATCTTCAGCTTCAGCCGCGAAGCAATTCAGAGGCTGAAAGCCAAAGCCAACAACTGGCGGTTAACGGAGGCGAACAACGCCTCTGAGTTGATGATGAAGCAAAGCAACGATCACCATAACCAGCAGAAGGAAAACAACAACGGCAAGGTTGCTACAATCTTCGAGAGCTTGTTCAAGAGCGCCGTTAATTCCAAACAGCAAACGGTTACAGCAACTGAAACGGTGGTTGAGATTTCATCGTTTCAGTCGGTGTGCGCGTTGCTCTGGCGCGCAGTGACGCGTGCAAGGAAGTTCCCGGCGTCAAAAACGACGACGTTTAGAATGGCAGTGAACTGTCGCCACCGGATAGTTCCGAAATTGGAACCGTACTATTTTGGAAACGCGATTCAAAGCGTGCCGACGTACGCTTCTGCAGGAGACGTGCTGTCTAGGGACCTACGGTGGTGCGCGGAGCAGCTGAACAAGAACGTGAAGGCGCACGATAACGCTATGGTGCTCCAGTTCGTAAATGATTGGGAAAAGAATCCAAGGTGCTTCCCGTTGGGGAACCCTGACGGTGCATCGATCACCATGGGTAGTTCACCGAGGTTCCCAATGTACGACAACGATTTTGGATGGGGAAGGCCGTTGGCGGTGCGGAGTGGAAAGGCGAACAAATTTGATGGCAAGATCTCGGCGTTTCCCGGCAGAGATGGAAGCGGCACCGTTGATTTGGAGGTTGTTTTGGCGCCCGAAACCATGGCAGGACTGGAGTCTGACCCCGAGTTCATGCTATACGCCACGAGTCAGTTATGA
1464
0.5389
MPSSSPILLSKCTVFPDQKSTLGTLKLSVSDLPMLSCHYIQKGCLFTQPSIPFHTLIPLLKSALSHTLSLFPPLAGRLTTDSDGYVYLTCNDAGVDFLHATATGLYIHDLLSPTDVHESFKEFFTFNRKVSYTGHSSPILAVQVTELADGVFIGCAVNHAITDGTSFWNFFNTFAQVCRGASQCLRNVPDFRRESVLISNAVLRLPEGGPVVTFNADAPLRERIFSFSREAIQRLKAKANNWRLTEANNASELMMKQSNDHHNQQKENNNGKVATIFESLFKSAVNSKQQTVTATETVVEISSFQSVCALLWRAVTRARKFPASKTTTFRMAVNCRHRIVPKLEPYYFGNAIQSVPTYASAGDVLSRDLRWCAEQLNKNVKAHDNAMVLQFVNDWEKNPRCFPLGNPDGASITMGSSPRFPMYDNDFGWGRPLAVRSGKANKFDGKISAFPGRDGSGTVDLEVVLAPETMAGLESDPEFMLYATSQL.
488
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Seca8g00938
487
Pfam
Transferase family
10
480
-
-
Seca8g00938
487
PANTHER
FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED
9
480
-
-
Seca8g00938
487
Gene3D
-
219
478
IPR023213
-
Seca8g00938
487
SUPERFAMILY
CoA-dependent acyltransferases
35
182
-
-
Seca8g00938
487
Gene3D
-
8
204
IPR023213
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Seca8g00938
Seca-Chr8
12712189
12713652
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Seca8g00938
59
474
Monolignol Biosynthesis Gene Families
AT5G48930
26.869
2.87e-31
123
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Seca8g00938
-
-
gmx:100779616
790.03
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Seca8g00938
8
12712189
12713652
Seca6g02144
6
81590789
81592210
PCT
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