Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00938 ATGCCTTCTTCTTCACCCATCTTGCTCTCAAAATGCACTGTCTTCCCAGACCAAAAGTCCACTCTCGGTACTCTCAAACTCTCGGTTTCAGACCTTCCTATGCTTTCTTGCCACTACATCCAAAAGGGTTGCCTCTTCACACAACCTTCCATCCCATTCCACACTCTCATTCCGCTCCTTAAATCTGCACTCTCTCACACTCTCTCTCTCTTTCCCCCTCTCGCCGGCCGCCTCACCACCGATTCCGACGGTTACGTCTACCTCACCTGCAACGACGCCGGCGTGGATTTCCTCCACGCCACTGCCACTGGACTCTACATCCACGACCTCCTGTCCCCTACCGATGTCCATGAGTCCTTCAAGGAATTCTTCACCTTCAACAGGAAAGTCAGTTACACCGGCCATTCCTCGCCGATTTTGGCCGTTCAGGTCACCGAACTCGCCGATGGCGTCTTCATTGGCTGCGCCGTCAACCACGCCATCACTGACGGAACCTCCTTCTGGAATTTCTTCAACACATTCGCGCAAGTCTGTAGAGGAGCCAGCCAGTGCCTCCGAAACGTGCCGGACTTTCGTCGCGAGTCTGTTCTTATCTCGAACGCCGTTCTCCGGTTGCCGGAGGGAGGTCCTGTGGTGACGTTCAACGCCGATGCGCCGCTGCGCGAGAGGATCTTCAGCTTCAGCCGCGAAGCAATTCAGAGGCTGAAAGCCAAAGCCAACAACTGGCGGTTAACGGAGGCGAACAACGCCTCTGAGTTGATGATGAAGCAAAGCAACGATCACCATAACCAGCAGAAGGAAAACAACAACGGCAAGGTTGCTACAATCTTCGAGAGCTTGTTCAAGAGCGCCGTTAATTCCAAACAGCAAACGGTTACAGCAACTGAAACGGTGGTTGAGATTTCATCGTTTCAGTCGGTGTGCGCGTTGCTCTGGCGCGCAGTGACGCGTGCAAGGAAGTTCCCGGCGTCAAAAACGACGACGTTTAGAATGGCAGTGAACTGTCGCCACCGGATAGTTCCGAAATTGGAACCGTACTATTTTGGAAACGCGATTCAAAGCGTGCCGACGTACGCTTCTGCAGGAGACGTGCTGTCTAGGGACCTACGGTGGTGCGCGGAGCAGCTGAACAAGAACGTGAAGGCGCACGATAACGCTATGGTGCTCCAGTTCGTAAATGATTGGGAAAAGAATCCAAGGTGCTTCCCGTTGGGGAACCCTGACGGTGCATCGATCACCATGGGTAGTTCACCGAGGTTCCCAATGTACGACAACGATTTTGGATGGGGAAGGCCGTTGGCGGTGCGGAGTGGAAAGGCGAACAAATTTGATGGCAAGATCTCGGCGTTTCCCGGCAGAGATGGAAGCGGCACCGTTGATTTGGAGGTTGTTTTGGCGCCCGAAACCATGGCAGGACTGGAGTCTGACCCCGAGTTCATGCTATACGCCACGAGTCAGTTATGA 1464 0.5389 MPSSSPILLSKCTVFPDQKSTLGTLKLSVSDLPMLSCHYIQKGCLFTQPSIPFHTLIPLLKSALSHTLSLFPPLAGRLTTDSDGYVYLTCNDAGVDFLHATATGLYIHDLLSPTDVHESFKEFFTFNRKVSYTGHSSPILAVQVTELADGVFIGCAVNHAITDGTSFWNFFNTFAQVCRGASQCLRNVPDFRRESVLISNAVLRLPEGGPVVTFNADAPLRERIFSFSREAIQRLKAKANNWRLTEANNASELMMKQSNDHHNQQKENNNGKVATIFESLFKSAVNSKQQTVTATETVVEISSFQSVCALLWRAVTRARKFPASKTTTFRMAVNCRHRIVPKLEPYYFGNAIQSVPTYASAGDVLSRDLRWCAEQLNKNVKAHDNAMVLQFVNDWEKNPRCFPLGNPDGASITMGSSPRFPMYDNDFGWGRPLAVRSGKANKFDGKISAFPGRDGSGTVDLEVVLAPETMAGLESDPEFMLYATSQL. 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00938 487 Pfam Transferase family 10 480 - -
Seca8g00938 487 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 480 - -
Seca8g00938 487 Gene3D - 219 478 IPR023213 -
Seca8g00938 487 SUPERFAMILY CoA-dependent acyltransferases 35 182 - -
Seca8g00938 487 Gene3D - 8 204 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00938 Seca-Chr8 12712189 12713652 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00938 59 474 Monolignol Biosynthesis Gene Families AT5G48930 26.869 2.87e-31 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00938 - - gmx:100779616 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00938 8 12712189 12713652 Seca6g02144 6 81590789 81592210 PCT