Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00902 ATGGATGAATTTTGTGAAGGTTCATGTGTTAACCTTGATGACGATAATATAGATATTAATGTTACTGGTGATGAATTTGATGTAAACCATAGTGAAGATGAAAATGATTCGGGTGGTCCTAGTGTGGAGGAAGAGTTAGGTAGAATGGATCATAGAGGTAAAAGAATGGAAGATTTGACTCCTGTTGATATTCGAAACATGGAGTTTGCTAGTGAAGAGCATGGGGAGATATTTTATAGGGCATATGCAAAACGTCATGGATTTGTTGTTAGAAAGGATGAGATTGATCAGGACATTAAGGGCAATGTTATTATGCGTCAGTTTGTTTGCAACAAAGAGGGTAGTAGGAACAAAAAACATTTGATGAGGGTGGATAGGAAAAAAGAACATAGGCCATTAACGCGTTTGGATTGTCAAGCTAAGATACGAATTCGCTTAGATTATAAGACAGATAAATGGAAAGTGGTTTCTTTTGTGGAGACCCACAATCATGAGCTTACCCCTTCTACTTTTGTGCACTTACTACCTAGTAATAGAGGGTTGAATAATGCTGATAAAGCCCAAGTAGGGAGGTTGCATGCATATGGTGTTAGAACGTGTCACATAATGGGGTACATGCTTGATCAAAAAGGGGGATATGGTTCCCTTGGGTTTTGTAGAAAGGATCTGTATAATTATATTGAACGACAGAAGCTAGAAAAGATTAAAGATGGGGATGCACATTCTGCCTTATGTTACATACAAGCAAAGGCAAACAATGATCCCACGTTTCGGGCTAGTTTCCTTGCTTCCGAGGACGGTACTCTAAATCATTTGTTTTGGGCGGATGGAGGTAGTAGGGTTGATTATTAA 852 0.3873 MDEFCEGSCVNLDDDNIDINVTGDEFDVNHSEDENDSGGPSVEEELGRMDHRGKRMEDLTPVDIRNMEFASEEHGEIFYRAYAKRHGFVVRKDEIDQDIKGNVIMRQFVCNKEGSRNKKHLMRVDRKKEHRPLTRLDCQAKIRIRLDYKTDKWKVVSFVETHNHELTPSTFVHLLPSNRGLNNADKAQVGRLHAYGVRTCHIMGYMLDQKGGYGSLGFCRKDLYNYIERQKLEKIKDGDAHSALCYIQAKANNDPTFRASFLASEDGTLNHLFWADGGSRVDY. 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00902 283 MobiDBLite consensus disorder prediction 26 53 - -
Seca8g00902 283 PANTHER OS01G0519700 PROTEIN 64 283 - -
Seca8g00902 283 Pfam FAR1 DNA-binding domain 78 167 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00902 Seca-Chr8 11959596 11960447 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g00902 FAR1 2.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00902 - - ccaj:109792835 293.508