Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca8g00874 | ATGAAGGGTTATGAACCCCGGTCAAGCTCTTCTTGTGCAGCCTGCAAGTTCTTGAAAAGAAGATGCATACCCAATTGTATATTTGCACCTTACTTTCGCTCTGATGAGTGCAAGAAATTTGCCAAGGTTCACAAGGTGTTTGGAGCCAGCAATGTGAGCAAGATCCTCATTGAAGTGCCAGAGGAGCAGAGGGAGGACACTGTGAATTCACTGGCTTATGAGGCTGAGGCAAGGCTTAGAGACCCAGTTTATGGATGCATAGGTGCCATAGCACTGTTGCAAAGGAAGATGGTGGAGCTTCAACATGACCTTGCCATTGCTAAGGATCGTCTTGCTCGTTATGCTACTGCTGCTGCTACCACCCCTTCAAGTTCCACTGATATCTCGAGTTCCAATGTTAGCTTGCCACCCTTCCCTGATTTCTTCACCTGCAGTGATTTCAATGACAGCTTCTGCCACAGCTCTTCATCTCAGTCATTGAGCAGACATGAAACGCATGGAGCACCCATTGTGACTTTCAGAGTCACGAACCCCACCAATGGTCCTTACACTTTACCGTGTCATGGGTATCCAAAGACTGATGCCAAGACCGTAAAGGTGGATCAGTTTCTTTGCCGTCTATAG | 624 | 0.4744 | MKGYEPRSSSSCAACKFLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQHDLAIAKDRLARYATAAATTPSSSTDISSSNVSLPPFPDFFTCSDFNDSFCHSSSSQSLSRHETHGAPIVTFRVTNPTNGPYTLPCHGYPKTDAKTVKVDQFLCRL. | 208 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca8g00874 | 207 | Coils | Coil | 90 | 110 | - | - | |
Seca8g00874 | 207 | ProSiteProfiles | LOB domain profile. | 10 | 111 | IPR004883 | - | |
Seca8g00874 | 207 | Pfam | Lateral organ boundaries (LOB) domain | 11 | 108 | IPR004883 | - | |
Seca8g00874 | 207 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 9 | 153 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca8g00874 | Seca-Chr8 | 11571164 | 11572551 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca8g00874 | 1 | 142 | AS2 family | AT3G11090 | 64.583 | 1.36e-63 | 192 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Seca8g00874 | LOB | 9.1e-38 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca8g00874 | - | K14486 | gmx:100305534 | 257.299 |