Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00872 ATGGCTTCCAAAACCATAATAGCCTCCTCCTTCTTCCTAGTCCTTTCTTTTTTGATCTTATTCTTCTTCCCAAACTCAGCCATTGCCTCTAGCAGTGTCTCTGCTGTGTTTGCCTTTGGTGACTCCACCATTGACTCTGGCAACAACAACCACTTCAACACACTCTTCCGTGGGGACCACTACCCCTACGGTCGTGACTTTCCAAACCACATCCCAACTGGAAGGTTCTCAAATGGAAAAATTTCAACTGATTACCTAACTCACATGCTAGGCATCAAGGATCTCTTGCCTGCTTACCTTGACCCTCATTTGACTGATAAGGATTTGCTTACTGGAGTCAGTTTTGGCTCTGGGGGTTCTGGATTGGATGAAAGTACTGTGGCCTTAGCAAGGGTCATGGATTTGACCACACAATTTAGGTTGTTTGAGGAAGCTATGATGAGGATTAGAAGAACTGTTGGAGAGGAAAAGGCCAATGAGATCATCAAGAATGCTGTGTTTGTCATCAGTACTGGTACTAATGACATGCTTTACAATGCTTATTTGTTACCAGCTAGGATGGCTCGTTTTGGTTCTGTTTCATCTTACCAAGATTTTCTTCTCCAAAATCTCCAATCTTTCATTCAGAGGCTCTATGGAGCAGGGGCTCGCCGGATTATGGTGGCAGGTCTTCCACCTATTGGGTGTTTGCCATTGCAAGTGACAGTAAGTAGCTTTTTCCCCAGCCGACATTGGCTCCAACGTGTTTGTAACGCCCAACAGAACACGGATTCACAAGGCTACAATGCTAAGCTTCAATCCCATGTTCATTTATTGCAAACCACACTCAATGCTGCCAAGGTCGCTTATTTCGATATCTATACGCCCATTCTAGATATGGTCCAAAACCCAGCCAAATATGGTTTTGAACAATCACTTCAAGGATGCTGTGGGACAGGGCTATTGGAGATGGGTCCTGTGTGCAATGCATTTGATCGAACATGCCCCAATTCATCTAGGTATCTCTTCTGGGACGCTGTGCACCTTACTGAAGCAGGATACTCGTTTCTTGCTGAGAGTGGTCGACAAAAATTGCTTCCATACCTTACTAATTAG 1095 0.4466 MASKTIIASSFFLVLSFLILFFFPNSAIASSSVSAVFAFGDSTIDSGNNNHFNTLFRGDHYPYGRDFPNHIPTGRFSNGKISTDYLTHMLGIKDLLPAYLDPHLTDKDLLTGVSFGSGGSGLDESTVALARVMDLTTQFRLFEEAMMRIRRTVGEEKANEIIKNAVFVISTGTNDMLYNAYLLPARMARFGSVSSYQDFLLQNLQSFIQRLYGAGARRIMVAGLPPIGCLPLQVTVSSFFPSRHWLQRVCNAQQNTDSQGYNAKLQSHVHLLQTTLNAAKVAYFDIYTPILDMVQNPAKYGFEQSLQGCCGTGLLEMGPVCNAFDRTCPNSSRYLFWDAVHLTEAGYSFLAESGRQKLLPYLTN. 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00872 364 CDD SGNH_plant_lipase_like 37 352 IPR035669 -
Seca8g00872 364 FunFam GDSL esterase/lipase APG 26 358 - -
Seca8g00872 364 Pfam GDSL-like Lipase/Acylhydrolase 36 352 IPR001087 GO:0016788
Seca8g00872 364 Gene3D SGNH hydrolase 23 358 IPR036514 -
Seca8g00872 364 PANTHER GDSL ESTERASE/LIPASE EXL3 18 352 - -
Seca8g00872 364 SUPERFAMILY SGNH hydrolase 116 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00872 Seca-Chr8 11547232 11549263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00872 7 353 Pollen Coat Proteome AT1G75910 33.714 2.52e-63 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00872 - - aprc:113874497 558.525