Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00824 ATGACCAACACCACCGCCCCTCTCCTCCCACCGGACTCCGAGCACTCCCCGGAAGATCCGATTCCGCAAAATGGGTCCATTTCCGGTGCGGTGTTCAACGTATCAACCACCATGATCGGTGCCGGAATCATGTCGGTTCCGGCGACAATGAAGGTGCTGGGCATAATTCCGGGGTTCGTGGTGATCGTCTTGGTGGCACTGATAACAGATGTCACGGTGGAGTTTATGTTGAGGTACACAAGTTCCGGTAAATCCACTACCTATGCGGGTATGGTGGGTGAGTCATTTGGGTCCCTAGGTTCCCTTGCTGTCAAGATTTGCGTCATCACAACCAATTTGGGTGTCCTCATCATCTATTTCATTATTCTTGGAGATGTGCTATGTGGAAATGAGTCCAAAGGAATCACACATTTGGGTATTCTACAAGAATGGTTTGGTATCCACTGGTGGACCTCTCGCGCTTTTGCTCTTCTCATAGTTGCGCTCGTCATAATGCTTCCACTTGTTATGTTACGACGTGTTGATTCACTCAGGTATAGTTCTGCAATATCAATCCTCCTAGCATTGGTCTTTGTTGCAATATGCTCATCAATGGCGCTTAATGCACTACTGTCTGGTAAAACCCAGTCACTGAGGATCCTGCCTGATTTCTCTCAAGTCACTGCCTTGATCTTTTCACCACTGTCCCAGTCTTTGTGA 699 0.4821 MTNTTAPLLPPDSEHSPEDPIPQNGSISGAVFNVSTTMIGAGIMSVPATMKVLGIIPGFVVIVLVALITDVTVEFMLRYTSSGKSTTYAGMVGESFGSLGSLAVKICVITTNLGVLIIYFIILGDVLCGNESKGITHLGILQEWFGIHWWTSRAFALLIVALVIMLPLVMLRRVDSLRYSSAISILLALVFVAICSSMALNALLSGKTQSLRILPDFSQVTALIFSPLSQSL. 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00824 232 MobiDBLite consensus disorder prediction 1 21 - -
Seca8g00824 232 Pfam Transmembrane amino acid transporter protein 24 202 IPR013057 -
Seca8g00824 232 PANTHER AMINO ACID TRANSPORTER 19 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00824 Seca-Chr8 10965509 10969426 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00824 8 219 Amino Acid or Auxin Permease AAAP Family AT3G56200 50.472 1.24e-69 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00824 - - gmx:100794031 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00824 8 10965509 10969426 Seca8g00824 8 10965509 10969426 ECH
Seca8g00824 8 10965509 10969426 Seca6g02009 6 79164540 79166348 PCT
Seca8g00823 8 10950938 10954371 Seca8g00824 8 10965509 10969426 PCT