Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00816 ATGGCTTCGTTTTGGTGTAGCTTGATGATTAGTGTGGCCCTCTTGGTCCTCTTAACATCAGGGAGTGCCAATGCAACACTTTCCACAAACTTCTACTCCACTTCTTGTCCAAAACTCTTTGACACTGTAAAATGCACAGTGGAATCCGCCATATCAAAGGAGGCCCGCATGGGTGCTTCTCTCTTGCGTTTGTTCTTTCACGATTGCTTTGTCAATGGATGTGATGGTTCGATTCTGCTTGATGACACATCAAGCTTCACCGGAGAGAAGAGCGCAAATCCCAACAGGAACTCTGCCCGTGGATTCGAAGTGATCGACAAAATCAAGTCAGCGGTGGAGCAAGTGTGCCCTGGTGTTGTCTCCTGCGCTGATATCCTTACCATCGCTGCCAGAGACTCCGTTCAGATACTTGGAGGCCCAAGTTGGGATGTGAAACTTGGAAGAAGAGACGCTAGGACGGCAAGCAGATCTGCTGCCAACAACGGCATCCCACCACCCACTTCAAACCTCAACCAACTCATCTCCAGATTCAATGCTCTTGGACTTTCCACCAAAGACTTGGTTGCATTGTCTGGTACTAATTTGGTCACACTAGGGGGTCACACAATTGGACAAGCAAGGTGCACCAACTTTAGAGCCCACATTTACAAGGAGACCAACATAGAAAGCTCTTTTGCTCGCACGAGGCAATCTAGCTGCCCCAGATCGACAGGGTCAGGGGACAACAACCTCGCACCTCTTGATCTCTTGACACCTACATCCTTTGACAACCACTACTTTAAGAACTTGATTGAGAAGAAGGGGCTTCTCCATTCTGACCAGCAACTCTTCAATGGTGGATCCACTGACTCCATAGTTCGTGGATACAGCGCCAACCCGAGCTCCTTTTACTCTGATTTTGTCACTGCCATGATCAAGATGGGAGACATAAGTCCCCTCACTGGATCTAAAGGAGAGATAAGAAAGAATTGCAGGAGGGTGAATTAA 987 0.4813 MASFWCSLMISVALLVLLTSGSANATLSTNFYSTSCPKLFDTVKCTVESAISKEARMGASLLRLFFHDCFVNGCDGSILLDDTSSFTGEKSANPNRNSARGFEVIDKIKSAVEQVCPGVVSCADILTIAARDSVQILGGPSWDVKLGRRDARTASRSAANNGIPPPTSNLNQLISRFNALGLSTKDLVALSGTNLVTLGGHTIGQARCTNFRAHIYKETNIESSFARTRQSSCPRSTGSGDNNLAPLDLLTPTSFDNHYFKNLIEKKGLLHSDQQLFNGGSTDSIVRGYSANPSSFYSDFVTAMIKMGDISPLTGSKGEIRKNCRRVN. 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00816 328 PANTHER PEROXIDASE 72-RELATED 24 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g00816 328 FunFam Peroxidase 164 307 - -
Seca8g00816 328 Pfam Peroxidase 44 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g00816 328 Gene3D Peroxidase, domain 2 164 307 - -
Seca8g00816 328 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Seca8g00816 328 SUPERFAMILY Heme-dependent peroxidases 27 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca8g00816 328 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g00816 328 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g00816 328 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g00816 328 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g00816 328 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g00816 328 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g00816 328 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g00816 328 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g00816 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g00816 328 ProSiteProfiles Plant heme peroxidase family profile. 26 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g00816 328 Gene3D - 30 328 - -
Seca8g00816 328 CDD secretory_peroxidase 27 327 IPR033905 GO:0004601|GO:0042744
Seca8g00816 328 FunFam Peroxidase 30 172 - -
Seca8g00816 328 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g00816 328 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g00816 328 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g00816 328 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g00816 328 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00816 Seca-Chr8 10839111 10841412 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00816 25 328 Peroxidase AT5G05340 75.000 2.55e-170 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00816 K00430 - gmx:100803637 535.798