Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00779 ATGGGTTTCACTAAGGAGTTGGTAAGAAGTGTCATCTCCAGAAACCATTCTTCTGTTGGGTCTCATGAAACCAAAGTGAGACGCAATAGTGCTGAGAATAGAAGATGGGTATCCGTTAGATCATACTTGTGTGGTGATGAATTCAATTCAGTTCTTGCAGAGGAAGATTCAGCTTCAGTTAAGAGCTCTGAAGTCACAGTTACACAGCCTATACAAGAGGACTTGTTGACTGATAAAGCAGACACCAAGAGTGAGGAAACTGTGGAGAATATAACAGAGAAAAGGCCAAATTCAAGCACCAAATCATTGAATGAGGAAGAAGCAGCTATTATTATTCAATCAGCATATAGAAGCTTCCTGTTGAGGCGTCAAAATGAAGAAATCATCAGTTCAAAAACTGATAAAGAGGAGCTCAATTTAGTGACAGAAAGTCCAGACAGAAAGTCCATGGCCACATCAGTTGAAGTCCAAACTGGGAACTCCACAGAAGTTTTCTCAGTTGAAGGAGAAAAAATGAGCATTTACCACCGTTTTCAGCACAAGACCAGAACTAAAGTAATAAAACCAAAGGAAGACTGGGATGACAGCACTGTGAGTAGCTATGTTTCAAAATTGAGGATGCAGAACAGAATGGAGGCAACAACTAGGAGGGAAAGAGCACTGGCTTATGCTTTCTCACAACAGCTAAGAATCTGTTCAAAGAGAAAATCAACAAAACATAATAGCATGGAAGCAAATATGAGCTGGAGTTGGCTTGAACGGTGGATGGCAACCCGTCTTCCAGAAACCTCATCAGTTGAAAGCCATGCTATGAAACAGTATGATCCTTTCAACAGTAATCACAAATTCACAATAAAGACAAGATTTTTAGATGCTGCAGGGGAAGAAAAGGAGAGCTGTGGATCAAATGAAGTGCCCCTTCATTTTGATAACTATTCAATAAATTCAAGAGAAGAAAATGTTAGCTTCAAACCACCAACACCAAAAAGCAATTTTAAAGCTAGGAGAACTGTTTCAAGGCGGAAAACAGTGCCAAGTTACCAATTCCATGAAGAGCATCCAAAGGTAAGTAAGAGAGATGGTTCAAGTAATGCTAGCAAGGATATTAAGCAAAAACAAAAGCAAGGAGGAAGTAGGACAGAAATGACATCTAGCAGCCCCAAAGCTTCTAATGAGTGA 1179 0.3986 MGFTKELVRSVISRNHSSVGSHETKVRRNSAENRRWVSVRSYLCGDEFNSVLAEEDSASVKSSEVTVTQPIQEDLLTDKADTKSEETVENITEKRPNSSTKSLNEEEAAIIIQSAYRSFLLRRQNEEIISSKTDKEELNLVTESPDRKSMATSVEVQTGNSTEVFSVEGEKMSIYHRFQHKTRTKVIKPKEDWDDSTVSSYVSKLRMQNRMEATTRRERALAYAFSQQLRICSKRKSTKHNSMEANMSWSWLERWMATRLPETSSVESHAMKQYDPFNSNHKFTIKTRFLDAAGEEKESCGSNEVPLHFDNYSINSREENVSFKPPTPKSNFKARRTVSRRKTVPSYQFHEEHPKVSKRDGSSNASKDIKQKQKQGGSRTEMTSSSPKASNE. 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00779 392 MobiDBLite consensus disorder prediction 81 102 - -
Seca8g00779 392 MobiDBLite consensus disorder prediction 345 375 - -
Seca8g00779 392 MobiDBLite consensus disorder prediction 319 392 - -
Seca8g00779 392 Gene3D iswi atpase 100 129 - -
Seca8g00779 392 PANTHER IQ-DOMAIN 5-RELATED 177 365 - -
Seca8g00779 392 MobiDBLite consensus disorder prediction 376 392 - -
Seca8g00779 392 Pfam IQ calmodulin-binding motif 107 124 IPR000048 GO:0005515
Seca8g00779 392 ProSiteProfiles IQ motif profile. 105 134 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00779 Seca-Chr8 9996679 10000739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00779 1 356 IQD Protein Family AT5G35670 42.233 6.18e-83 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00779 - - gmx:100807137 620.928