Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00770 ATGGGGCGCATGTGCATCTTATGGCTAGTACTAGTCATGATAACCCAAATTCTAGTGCTAGTTTCAGAGGGTAGGAATGTCCCAGCCATCATTGTTTTTGGAGACTCCACTGTGGATTCAGGGAACAACAATGTTATAGCTACGGTTCTGAAGAGTAACTTTAGGCCTTATGGCCGTGACTTTGACGGTGGCCAACCAACCGGACGGTTTTCCAATGGCCGTGTTCCACCAGATTTCATTGCTGAGGCTTTTGGAGTGAAAACCTCTATTCCGGCATATTTGGATCCTGCTTATACCATTCAAGATTTTGCCACTGGAGTTTGTTTTGCCTCTGCTGGAACTGGCTATGATAATGCAACTTCTGCCGTCCTAAAATTAATTAATATATATGGGGTTGTCAATATCTCACAGAATGTGATACCACTATGGAAGGAAGTAGAGTACTACAAGGAGTACCAAGCCAAGTTGAGAGACCATCTTGGTGTAGAGAAGGCAAATGAAATCATAGGCGAGGCATTGTATTTGATAAGCTTAGGAACCAATGATTTCCTTGAAAACTATTATGTGTTCCCTACCCGAAGACTTCATTTCACGGTCACACAATATCAGGATTTTCTATTGGGTATTGCTGAGAATTTTGTTAAGGAATTGTACTCACTTGGTGCCCGAAAATTATCCATAACTGGTCTTGTTCCTATTGGGTGCCTCCCCTTAGAAAGGGCAACAAACATTGTAGGTTACCATGGATGCAATGAAGAATACAACAACGTGGCTTTGGAATTCAATAAGAAGTTGGAGAATATGATATCAAAGCTAAATAGGGAGCTCCCACAATTGAGGGCAATGTCGGGAAATGCATATCCCATCGTTGATGATATCATTAAAAGACCTTCCTCATATGGATTTGAGGTAGTAGAGAAGGGTTGTTGTTCCACAGGAACATTTGAGATGAGTTACTTATGCAGTGACAAGAACCCACTTACATGTCCTGACGCCACCAAATACATGTTTTGGGATGCCTTCCATCCTACGGAGAAGACAAATCGCATTGTCTCAAATTATTTAATTCCAAAGCTTCTAGCAACCTTCAATTAG 1095 0.4155 MGRMCILWLVLVMITQILVLVSEGRNVPAIIVFGDSTVDSGNNNVIATVLKSNFRPYGRDFDGGQPTGRFSNGRVPPDFIAEAFGVKTSIPAYLDPAYTIQDFATGVCFASAGTGYDNATSAVLKLINIYGVVNISQNVIPLWKEVEYYKEYQAKLRDHLGVEKANEIIGEALYLISLGTNDFLENYYVFPTRRLHFTVTQYQDFLLGIAENFVKELYSLGARKLSITGLVPIGCLPLERATNIVGYHGCNEEYNNVALEFNKKLENMISKLNRELPQLRAMSGNAYPIVDDIIKRPSSYGFEVVEKGCCSTGTFEMSYLCSDKNPLTCPDATKYMFWDAFHPTEKTNRIVSNYLIPKLLATFN. 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00770 364 Coils Coil 262 282 - -
Seca8g00770 364 FunFam GDSL esterase/lipase APG 20 359 - -
Seca8g00770 364 SUPERFAMILY SGNH hydrolase 29 359 - -
Seca8g00770 364 Pfam GDSL-like Lipase/Acylhydrolase 30 355 IPR001087 GO:0016788
Seca8g00770 364 CDD SGNH_plant_lipase_like 28 358 IPR035669 -
Seca8g00770 364 Gene3D SGNH hydrolase 19 361 IPR036514 -
Seca8g00770 364 PANTHER GDSL ESTERASE/LIPASE EXL3 13 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00770 Seca-Chr8 9888119 9893336 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00770 28 356 Pollen Coat Proteome AT1G75910 36.446 4.44e-63 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00770 - - gmx:100805486 596.66