Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00764 ATGATTTCCCACCTCGATCAAAACCATCTCTTCCTTTTCTTCCCTGCTGTATGCAAAAAATCCCTTGCAACACACAACCCATTTGCTGTCTCTCTCAAAGGTTCAACCTTTCGCGATTGTAAGGCTACCCACTTTCTTCAACTTCGTCGACTGTACTGTTTTCAATCATCCAATCCTGTGAAACGGTTATCTCGGAATGCAAGGGTAAAGGTGCAGGATGTGCTGCTAGATTACTTGCATTCAAGCAGGGGATACAGCTTCATGGATTCTGAGTTCATTAGCAAGAACTCACCACATTTCATTCAAAGTTTGGTTTCAGAGTTTCATGAACAAGATGATGATGTTGCAGGGTCATTAAGGAGGTTCCTTAGGTACAACCCCATCAATGAGTTTGAACCTTTTTTTGAGAGTTTGGGGATTAACCCTCATGAGTTGCATTTGTTTCTCCCACGTGGGATGATGTTTTTGTCTGATGATGATGTTTTGCTTGAAAATTTTCATGTTTTGACTAATTATGGGGTCCCAAGAAATAGAATAGGGAAAATTCATAAGGAAGCAAAAGAGGTTTTTGGGTACCCTAGTGGATTGTTGTCATTGAAATTTCAAGCTTATGAAAATTTGGGTTTGAGTAGGTCCAGGGTCATCAAGCTCATTGTTTGTTGCCCTTCACTTTTGATTGGTGAAACAAGCAGTGAATTAGTCACTATTCTTGATTGGTTGAAGAAAATTGGTATTGAACATGATTGGATTGGGAATTACTTGTCTTGTTCAAAGACATATAACTTCAAAAAAATGCTTGATGCTATGAAATTTCTTCATAAAGTGGGCTATTCTGAGAAACAGATGCACAATTTGTTCATGGAAAATCCTGCATTATTGTTGGAAGGTCTTGAGAAGAAGGTGTATGTATTTTTGGGTCTATCACTTAAGTTAGGTCTCAAGAAGAATGTGATTTATTCTTCTTTTTTAGAATATCCCCATATCTTGTCAAGTAAGTCTGTAAAGAATCTTTTGGGAGTGGTTGGTTTTTTGTATTATATTGGAATGGGAACAGATGACATTGCACACATTTTGTCTAATCACATGCATCACCTGAGCTCTCATCCCTTGAAAGGCCCTAAAGCTGTTTGTTTTCAGTTAAAAATTAGAAAAGCTGAGTTATGCCAAATCATAAAGGATGATCCACTGAAGCTGATTATTTTGGCTTCAAAACTGAAACAGAATAGTTCTGTACTGTTATCTTGTGATGAATCAAGTAAACATTTGGAGAAAACAACATTCTTGCGGAAACTTGGATATGCAGAGAACTCTGAGGAGATGGCAAAAGCAGTAAAAAGGTTCCGAGGGAGAGGTGATCAATTACAGGAGAGGTTTGATTGCCTGGTTGAAGCTGGTTTGGACTATAACATTGCAATCAAAATGATACAACATGCTCCTATGATTCTAAACCAGAACAAAGTTGTAATTGAAAAGAAGATTGATTTCTTAAGAAACATTTTAGGTTATCCATTAGAATGTTTAGTTGGATTTCCAGCATACTTGTGCTATAATTTGGAGAGAATTATGCTCAGATTTTCAATGTATGCTTGGTTGAAGGAAAGGAAAGCAGTAAATCCTATGTTGACCTTGAGCTCTATCCTTGTATCATCTGAGGAACGGTTTATAAAATACTTTGTGAATGTGCATCCTGAAGGTCCAATCATCTGGAAAGGTCTAAAGAGTTTATTGCAAAAAGATAAGAGCCAACACATTCTTTGTATTTAG 1764 0.3707 MISHLDQNHLFLFFPAVCKKSLATHNPFAVSLKGSTFRDCKATHFLQLRRLYCFQSSNPVKRLSRNARVKVQDVLLDYLHSSRGYSFMDSEFISKNSPHFIQSLVSEFHEQDDDVAGSLRRFLRYNPINEFEPFFESLGINPHELHLFLPRGMMFLSDDDVLLENFHVLTNYGVPRNRIGKIHKEAKEVFGYPSGLLSLKFQAYENLGLSRSRVIKLIVCCPSLLIGETSSELVTILDWLKKIGIEHDWIGNYLSCSKTYNFKKMLDAMKFLHKVGYSEKQMHNLFMENPALLLEGLEKKVYVFLGLSLKLGLKKNVIYSSFLEYPHILSSKSVKNLLGVVGFLYYIGMGTDDIAHILSNHMHHLSSHPLKGPKAVCFQLKIRKAELCQIIKDDPLKLIILASKLKQNSSVLLSCDESSKHLEKTTFLRKLGYAENSEEMAKAVKRFRGRGDQLQERFDCLVEAGLDYNIAIKMIQHAPMILNQNKVVIEKKIDFLRNILGYPLECLVGFPAYLCYNLERIMLRFSMYAWLKERKAVNPMLTLSSILVSSEERFIKYFVNVHPEGPIIWKGLKSLLQKDKSQHILCI. 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00764 587 SMART mt_12 437 467 IPR003690 GO:0003690|GO:0006355
Seca8g00764 587 SMART mt_12 320 350 IPR003690 GO:0003690|GO:0006355
Seca8g00764 587 SMART mt_12 504 535 IPR003690 GO:0003690|GO:0006355
Seca8g00764 587 SMART mt_12 215 246 IPR003690 GO:0003690|GO:0006355
Seca8g00764 587 SMART mt_12 283 314 IPR003690 GO:0003690|GO:0006355
Seca8g00764 587 SMART mt_12 472 503 IPR003690 GO:0003690|GO:0006355
Seca8g00764 587 Pfam mTERF 269 434 IPR003690 GO:0003690|GO:0006355
Seca8g00764 587 Pfam mTERF 420 554 IPR003690 GO:0003690|GO:0006355
Seca8g00764 587 Gene3D Transcription termination factor 3, mitochondrial 125 234 IPR038538 -
Seca8g00764 587 Gene3D Transcription termination factor 3, mitochondrial 302 565 IPR038538 -
Seca8g00764 587 PANTHER CGI-12 PROTEIN-RELATED 75 301 IPR003690 GO:0003690|GO:0006355
Seca8g00764 587 FunFam mTERF family protein 108 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00764 Seca-Chr8 9824545 9826308 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Seca8g00764 mTERF 9.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00764 - - aprc:113846643 893.264