Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00723 ATGTTAGGTGGAGATCAATCTTTCTCAAATCCTTGTCAATGGACATATCACGTTTTCTTGAGTTTTAGAGGACAAGATACACGTCTAGATTTTACAGATTACCTATATGCTGCGTTGGTGCGCAAGGGAATCATAACATTCCGAGATGACAAACAACTCCAGAAAGGAGATGTGATTTCGGTTGAACTCTTTCGAGCGATTGAGCAATCCCTCGCTGCTGTTATTGTTCTCTCTAAGAACTATGCTACTTCCTCTTGGTGTTTGGATGAGCTCCAAAAAATTCTTGGATCAAAGAGACTAGTTTTCCCTGTTTTCTATGGGGTCAGTCATGATGACGTGGAACATTTTGCTGAGGCTTTTAGAAAACATGAAAGGAGATATGATAGAGAGAAGGTGCAAAAGTGGAGAGATTCCTTGAAAGAAGTTGCAGGCATACGACCTCGTTGGGAGTCCAAGAATTTCAGACATGAAACAGAGCTCATTGAAAATATTGTTGAATCGGTATGGACAAAACTCCGCCCTAAAATGCCGTCTTACCAGGATGGGTTAGTTGGAATTGACTCAAGAATTAAAAGAATGGATTCACTTTTGAGGATAGAATCAAAGGAGGTTCTCTTTAATGGAATATGGGGTATGGGTGGCATGGGAAAGACAACTCTTGCCAGAGTTGTCTTTAAGAATATCCAAGGCCAGTTTGATTTTAGTTGCTTCCTTGACAATGTTAGAGAGAATTCTAGAGAAAGAGATGGTATAATTCACTTACAAAATAAACTTCTTTCTCAATTGAAAATAAAAGGCTTAGAAATTAGAGATTTGGATGAAGGAAAGAACACAATAAGAAACCTTTTGTCCAAGAAGAAAGTTCTCCTTGTGATTGATGATGTTGATGACATAAGTCAACTAGAGAGTTTGGTTGAGAGAGAGTGGTTTGGCCCTGGGAGCAGAGTTATAATAACAACAAGAGACATACATGTACTAACATCACATGGAGTAGTAGAAAGTTATAAAATTGAAGCCTTAAATTCAAATGAGTCCCTTCAACTCTTGAGTCAAAAGGCCTTTAAAAGAGATCAACCACATGAGCATTATTTGGACTTGTCAAAAGCTGTTGTTCACTATGCTGGAGGCCTTCCTTTAGCCCTTAAGTTATTGGGTTCATTTCTTTGTGGAAGAAGTGAATCTCAATGGAAAGAAGTTGTGGACATGATAAAAGATGTACCACCTATTGATATTGTGATGAAATCACTTAGAATAAGCTACAATGGGTTACCAATACGTTATAAGACTTTATTTCTTGATATTGCATGTTTCTTCAAGGGGAGGATAAAAGAGCTTGTCACGCAAATACTTCAAATTTGTGACCGTTATCCACCAATCGGAATTGAATTTTTAATTGAAAAATCATTGGCAACTTATGATGAATTTACTTTGGGCATGCATGACTTGCTTCAAGAAACAGGAAGGGAAATTGTCTTTGAGGAATGTCCTATAGATGCTAGCAAACGTAGTAGGCTGTGGTCTCGGAAGGATATTGATCAAGTACTAAAATATAGTAAGCCAAATGAGTCGGTTCAAGGCATAGTTGTGAACTCATCCACAAAGCCATATGAAGCAATGTGGGATCCCGAAGCTTTCTCAAGGATGTATAATCTTAAATTTCTAATCATAAATCAGAGTATACAATTTCCTCGTGGCCTCAAATGTCTTTGCAGTTCATTGAGATTTCTACAGTGGATGGAGTGTCCTTTAGAAGCTCTGCCAGATGGTGTGCGGCTAGATGAAGTTGTAGAGTTGAAAATACATGACAGCAAAATTAAAAAGATTTGGAGTGAAACTCAATTTTTTGCAAAGCTGAAGTTCATTGATTTGAGTTTCTCCAAATATCTAATTCAAACTCCAATAGTTTCTGGGGCTCCATGTCTAGAAAGGATGCTTCTTATAGGTTGTACAAACCTTGTTGAGGTTCATCAATCTGTTGGACAATACAAGAAGCTTGTTGTGTTAATGTTGAGTGGTTGCAAAAATCTTCGTATCCTTCCAAGAAAATTTGAGATGGATTCTTTGGAGGAGTTGATTCTTTCTGGCTGCTCAAAAGTTAAAAAGCTCCCTGAGTTTGGAAAAACTATGAAATGTTTATCACTGCTTGATTTGGAGAATTGCAAGAATCTTCTCTGCTTACCAAATTCCATTCACAATTTGAAGTCTCTTAGAAAATTACATATTTCTGGTTGCTCAAAATTTTCTAGTCTCCCCAACAATATCAATGAAAATGAGTCTTTAGAGGAGATTGATGTGAGTGGGACTGCAATAAGAGAAATAACTTTATCCAAAATCCGTCTAGAAAATCTCAAAGTGCTCTTATATGGTGGAAGGAAAGAGCTACCATCCAAATCAGGGGACTTACTTTTAAAGATCTCAAAGTTTAGAAGGCAACCTAATCCAAAGGAGTTGATCTTGCCTCCTCTCTCCTCCTTATTTGCCTTGACGTCCTTGAATTTAAGTTATTGTAACCTTAATGATGAATCAATTCATGATCTTGGTTCCTTAACATTGTTGCAAGAACTAAATCTAAGTGGGAACAATTTTGTTAACCCACCTACCCATTGCATTAGTAATCTTTCCATGCTACAGATTTTGACCATAACTGATTGCCAAAGGCTTGAGTCGTTGCCTATGCTTCCACCAAATGTTCAATCCCTATATACAACTAATTGTACTCAACTCAAGCCCTTAAATTTGGATGAACAAATGCTATGGAAAATCTTTGAGTCACATTTACATTTGGATCAGATGGACTATTTGCCAGAGCTTTGGTTCATCATACCGGGGAGTGAAATTCCACCATGGTTTGAAAATCAAGACTCCTTTCAAATTGATCCATCACAGCAACCATATAACAAGTTGGGTTGTGATTCAGTTACATCAATAAAATTGGAAGTACCAAACCATTGTAAATCAAGTGAATGGTGGGGAATTGCAGTATGCTTAGCATTGGAATCGTTACATATGGAGGTGTCATCTCCATCTAACCATCATGTGAATGAGCTAGAGTGCGTTTATTATTGGGTCTGTAAAGCTCCTGATCGAGAACCTGACCCGAATTTTCCGATTGCATCCAAATATGGGTCCTTGGTTTATGAATTCAATGATCCTTACATCCATATTTTGTTCTTGACTAGTGAACATGTATATATCCAACATTATCTAAGTGGGGAGCAAAGCCAACTTCAACTGATTTTTTATGTGGTGAATCTTTCAAAGCGTTGGAAGTCAACAATAACCAAGTGTGGGTGCCGTGTAATATGTAAGGAGGATATTGAAAATTGGCACAAGGACTTGTATTGTACTCATTTGATTTCAGCGAATCAAGATTGA 3375 0.3748 MLGGDQSFSNPCQWTYHVFLSFRGQDTRLDFTDYLYAALVRKGIITFRDDKQLQKGDVISVELFRAIEQSLAAVIVLSKNYATSSWCLDELQKILGSKRLVFPVFYGVSHDDVEHFAEAFRKHERRYDREKVQKWRDSLKEVAGIRPRWESKNFRHETELIENIVESVWTKLRPKMPSYQDGLVGIDSRIKRMDSLLRIESKEVLFNGIWGMGGMGKTTLARVVFKNIQGQFDFSCFLDNVRENSRERDGIIHLQNKLLSQLKIKGLEIRDLDEGKNTIRNLLSKKKVLLVIDDVDDISQLESLVEREWFGPGSRVIITTRDIHVLTSHGVVESYKIEALNSNESLQLLSQKAFKRDQPHEHYLDLSKAVVHYAGGLPLALKLLGSFLCGRSESQWKEVVDMIKDVPPIDIVMKSLRISYNGLPIRYKTLFLDIACFFKGRIKELVTQILQICDRYPPIGIEFLIEKSLATYDEFTLGMHDLLQETGREIVFEECPIDASKRSRLWSRKDIDQVLKYSKPNESVQGIVVNSSTKPYEAMWDPEAFSRMYNLKFLIINQSIQFPRGLKCLCSSLRFLQWMECPLEALPDGVRLDEVVELKIHDSKIKKIWSETQFFAKLKFIDLSFSKYLIQTPIVSGAPCLERMLLIGCTNLVEVHQSVGQYKKLVVLMLSGCKNLRILPRKFEMDSLEELILSGCSKVKKLPEFGKTMKCLSLLDLENCKNLLCLPNSIHNLKSLRKLHISGCSKFSSLPNNINENESLEEIDVSGTAIREITLSKIRLENLKVLLYGGRKELPSKSGDLLLKISKFRRQPNPKELILPPLSSLFALTSLNLSYCNLNDESIHDLGSLTLLQELNLSGNNFVNPPTHCISNLSMLQILTITDCQRLESLPMLPPNVQSLYTTNCTQLKPLNLDEQMLWKIFESHLHLDQMDYLPELWFIIPGSEIPPWFENQDSFQIDPSQQPYNKLGCDSVTSIKLEVPNHCKSSEWWGIAVCLALESLHMEVSSPSNHHVNELECVYYWVCKAPDREPDPNFPIASKYGSLVYEFNDPYIHILFLTSEHVYIQHYLSGEQSQLQLIFYVVNLSKRWKSTITKCGCRVICKEDIENWHKDLYCTHLISANQD. 1125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00723 1124 Gene3D - 10 173 IPR035897 -
Seca8g00723 1124 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 145 IPR035897 -
Seca8g00723 1124 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 704 IPR044974 GO:0006952
Seca8g00723 1124 Gene3D Ribonuclease Inhibitor 685 759 IPR032675 -
Seca8g00723 1124 Gene3D Ribonuclease Inhibitor 540 684 IPR032675 -
Seca8g00723 1124 ProSiteProfiles TIR domain profile. 14 172 IPR000157 GO:0007165
Seca8g00723 1124 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 434 IPR027417 -
Seca8g00723 1124 Gene3D Ribonuclease Inhibitor 804 938 IPR032675 -
Seca8g00723 1124 SMART till_3 15 145 IPR000157 GO:0007165
Seca8g00723 1124 Pfam TIR domain 16 185 IPR000157 GO:0007165
Seca8g00723 1124 Gene3D - 339 424 IPR042197 -
Seca8g00723 1124 Pfam NB-ARC domain 194 405 IPR002182 GO:0043531
Seca8g00723 1124 Gene3D - 174 334 IPR027417 -
Seca8g00723 1124 PRINTS Disease resistance protein signature 282 296 - -
Seca8g00723 1124 PRINTS Disease resistance protein signature 374 388 - -
Seca8g00723 1124 PRINTS Disease resistance protein signature 707 723 - -
Seca8g00723 1124 PRINTS Disease resistance protein signature 206 221 - -
Seca8g00723 1124 SUPERFAMILY L domain-like 479 934 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00723 Seca-Chr8 9176320 9181764 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00723 16 788 WRKY Transcription Factor Family AT4G12020 30.703 5.73e-89 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00723 - - gmx:100799850 1562.74