Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00718 ATGATGGCATCTTCCATCTTCAATCTTTTTCTATCATCATTCATTCTTTGCACTTTCTTGCAGCAACACACTTCTCATGCCCTTAAAAAAAAGACCTACATTGTATACTTGGGAGGACATTCTCATGGTCCAAATCCATCTCTTGATGATCTTGAGTCAGCCACCAATTCCCATTATGATTTTCTGGCTTCAGTCTTTGGAAGCCGTGAGAAAGCAGAGGAAGCAGTTTTGTACTCGTACAATAAGCACATCAATGGGTTTGCTGCACTACTTGAAGAGGAAGAGGCGTCAGAGATTGCAAAAAATCCAGATGTAGTTTCTGTTTTCTTGAGCAAAGAGCATAAATTGCACACTACAAGGTCATGGGAGTTTCTTGGAATGGAAAAAGATGGAGGAATTGCTGTTGATTCCCCTTGGTGGACGGCTAGATTTGGCGAAGATACCATCATGGCTAATTTAGATACAGGGGTTTGGCCCGAACACATAAGTTTCAGTGACTTCGGATACGGTCCAGTGCCATCAAAGTGGCGTGGGAATGGAGTCTGTGAGATTGACCATTTTACAAGTTTAAATACAGCACACTGTAACAGGAAGCTGATCGGAGCAAGAATCTTTAGCAAAGATTATGAGTCACGATATGGCAAACTGAATCCCTTAAATCTCACTGCACGTGACTTTGTTGGCCATGGTACTCATACTCTGTCCACAGCTGCTGGTAACTTCATTCCTGGTGCAACCATATTTGGTAATGGCAATGGCACTGCAAAGGGTGGTTCCCCAAGAGCTCGTGTGGCAACCTACAAAGTTTGTTGGTCTGCATATGATGCTGGTGGTTGCCATGAAGCTGACATTCTACAAGCATTTGATCAAGCAATATATGATGGTGTTGATGTCATCTCAACCTCTGTGGGTGCCTCTGATCCTTATATTGAAGCTTTTTTCACAGATGGGATTTCCATTGGGGCCTTCCATGCAGTTGCTAGAAATATTGTGGTGGTTTGCTCTGCTGGCAATGATGGGCCAGCACCTAGAACTGTAACAAATGTGGCACCTTGGTCCTTCACAGTTGCTGCTAGTACAATAGACAGGGATTTTTGGAGTGACATTTCTCTTGCAAACAAACATTACTTTAAGGGAGCTAGTCTTAGTAGAGGCTTACCATCAAGGAAATTTTATCCATTGGTTCATTCTATTGATGCTAGATTTCCTAATGCCACAATTGAAGATGCTCGTTTTTGCAAGCATGGAACACTTGATCCTACTAAAGTAAGGGGAAAATTATTAGTCTGCATTAGACAAGACAGAACAACATCAGTTGCTCAGGGCTATGAAGCTGCTCTTGCAGGGGCAGTAGGAATATTTGTGATCAATGATGAGAAAAGTGGTAATATACTTCTAGCTGAGCCTCATCCTTTACCTGGTGCAAGTTTGGATGTCTATGAGGATGAGGATATTGATGAGCGTGAATGGTTTGGAAAAGGAGGGGAAATGGCTGCTTATATGAATGCAGCAACAACATATACAGGAATAAAGCCAGCTCCAATTATGGCTGGATTCTCATCCAGGGGTCCTAGTGCTGTGCAGCCATTGATACTCAAGCCTGATGTAACTGCTCCTGGTGTAAACATATTGGCTGCATATTCACTAGCCACAAGTCCATCTAATTTACCATCAGATAGAAGAAGAGTTCCTTTCAATATGCAACAGGGAACTTCTATGTCTTGCCCTCATGTTGCTGGCATTGTTGGTCTTCTCAAGACACTTCATCCTAGTTGGAGTCCAGCAGCTATCAAATCAGCCATTATGACTACTGCTACCACACTGGATAACACCAATCAACCGATTCGAGATGCGTTTGATCAGATAGCAACACCATTTGAATATGGCTCTGGACATATTAGGCCTAACCTTGCAATGGACCCTGGACTTGTTTATAATCTAAGCACAATTGATTACTTGAATTTCATATGTGCTTCTGGTCATGACCAAAATATACTCAAGTTCTTTAATCATAGCTCTTTCACTTGTCCAGAGTCTTACAACATTGAAAATTTCAACTATGCTTCAATCACTGTAACTAATCGTGGGATGAACCCTATAAATGTTACTCGTACAGTTACAAATGTTGGGCCTCCAAGCACATATATTGTGGAAACTCACTCCCCTAAAGAATTTAAGGTCCTTGTTCAACCTAGTTCATTGACTTTTATGACAATTAGAGAAAAGAAGACCTTCCAGGTTATTCTGCAGGCAATAAGTTGGCCACCTCATGGTTTTCCAATATTTGGGAACTTGACATGGACAAATGGCAAGCACAGAGTAACCAGTCCTATTGTAGTTTTGTAA 2346 0.4169 MMASSIFNLFLSSFILCTFLQQHTSHALKKKTYIVYLGGHSHGPNPSLDDLESATNSHYDFLASVFGSREKAEEAVLYSYNKHINGFAALLEEEEASEIAKNPDVVSVFLSKEHKLHTTRSWEFLGMEKDGGIAVDSPWWTARFGEDTIMANLDTGVWPEHISFSDFGYGPVPSKWRGNGVCEIDHFTSLNTAHCNRKLIGARIFSKDYESRYGKLNPLNLTARDFVGHGTHTLSTAAGNFIPGATIFGNGNGTAKGGSPRARVATYKVCWSAYDAGGCHEADILQAFDQAIYDGVDVISTSVGASDPYIEAFFTDGISIGAFHAVARNIVVVCSAGNDGPAPRTVTNVAPWSFTVAASTIDRDFWSDISLANKHYFKGASLSRGLPSRKFYPLVHSIDARFPNATIEDARFCKHGTLDPTKVRGKLLVCIRQDRTTSVAQGYEAALAGAVGIFVINDEKSGNILLAEPHPLPGASLDVYEDEDIDEREWFGKGGEMAAYMNAATTYTGIKPAPIMAGFSSRGPSAVQPLILKPDVTAPGVNILAAYSLATSPSNLPSDRRRVPFNMQQGTSMSCPHVAGIVGLLKTLHPSWSPAAIKSAIMTTATTLDNTNQPIRDAFDQIATPFEYGSGHIRPNLAMDPGLVYNLSTIDYLNFICASGHDQNILKFFNHSSFTCPESYNIENFNYASITVTNRGMNPINVTRTVTNVGPPSTYIVETHSPKEFKVLVQPSSLTFMTIREKKTFQVILQAISWPPHGFPIFGNLTWTNGKHRVTSPIVVL. 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00718 781 ProSitePatterns Serine proteases, subtilase family, serine active site. 570 580 IPR023828 -
Seca8g00718 781 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 45 780 IPR045051 -
Seca8g00718 781 FunFam Subtilisin-like protease SBT1.5 147 372 - -
Seca8g00718 781 CDD Peptidases_S8_3 114 606 IPR034197 -
Seca8g00718 781 SUPERFAMILY Subtilisin-like 116 643 IPR036852 GO:0004252|GO:0006508
Seca8g00718 781 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 117 IPR037045 -
Seca8g00718 781 PRINTS Subtilisin serine protease family (S8) signature 145 164 IPR015500 -
Seca8g00718 781 PRINTS Subtilisin serine protease family (S8) signature 225 238 IPR015500 -
Seca8g00718 781 PRINTS Subtilisin serine protease family (S8) signature 569 585 IPR015500 -
Seca8g00718 781 Pfam Fibronectin type-III domain 684 780 IPR041469 -
Seca8g00718 781 Gene3D - 656 781 - -
Seca8g00718 781 Gene3D Peptidase S8/S53 domain 147 652 IPR036852 GO:0004252|GO:0006508
Seca8g00718 781 Pfam Peptidase inhibitor I9 32 117 IPR010259 -
Seca8g00718 781 FunFam Subtilisin-like protease SBT5.3 21 117 - -
Seca8g00718 781 Pfam Subtilase family 145 610 IPR000209 GO:0006508|GO:0008236
Seca8g00718 781 CDD PA_subtilisin_like 368 485 - -
Seca8g00718 781 Gene3D - 362 508 - -
Seca8g00718 781 ProSiteProfiles Serine proteases, subtilase domain profile. 121 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00718 Seca-Chr8 9002909 9007484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00718 20 780 Subtilisin-like Serine Gene Family AT2G04160 51.697 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00718 - - gmx:100794135 1232.24